Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0965 ATGCTCCCTCTCTCTCCTCCTGACCTGCTGCTGCAAATAATGCCGGCGTCGGTTTTCCTCCTCCTTCTCAGCTTGCTCCTCCCTTCTCAAGTCAAGTCATTTTCTCTGGGTCTGTCATTTGCTTCATCCGAACAAACTAGAACGTGGTTTGTTAAACCTTCTTCTAGACCATCTTCTGCACCTGCGCCTTCTTCTATACCATCTTCTGCACCTGCGCAATCTCCATCTTATCAAGGTCCCAGGGCGTCTACAACACCAAAACATCCCCACCGTCGCCATCATAGCATCAGACCTTATGTAGCGGCTCCGCCCCCTTCAAAAGACCAAGCTTGTGACCAATCCTGTACTGATCCGCTCACATCAACTCCCTTTGGTTCACCTTGCGGTTGTGTATATCCTATGAAAGTCAGACTTACACTGGATGTAGCTCCTTATGCTGTTTTTCCAGTGATGACTGAGTTAGAGAATGAAGTTGCATTAGGCACGTATTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCATTTCTGACAGTCAAAATGAGGGAAGAACCATTGTTGATATTAACTTGGTTCCATTGGGAGAGAAATTTGACAATACAACTGCAGCTCTGACATATGAGAGGTTTTGGCACAAGAAAGTTCCTTTAAATAGGAGCCTTTTTGGTGATTACGCAGCCGTATACATTATATATCCAGGAATTCAATCTTCACCACCATATGGATCCTTAACTGGGAGTGGTCCTGAAGAAGGTCCTCATGGTATTCTGCCAGTCAGCGCCAACTTTGCAAGCAAGAACCAGAAAACGAATCTTAGAACCATTATCATCATTGCTTTATCTTCCTTCGTGCTCTTGTTGGTTTTAGTTGGTGCACTTTTCATCACTTTGAAATGGAGGAAGACTAGGAGACCATCAAGTGCTGTTGGCCCTGCACTCACATCTTCTCTAAACAAGAGATCTGGTTTGGGGTCTATATTGTCAAGTAGTATCACAAGCTCAACATCTATCTCCCTCATGTCCACAATGGCTACTTCCCTTCTCTCTGTCAAAACATTTTCGCTTTCTGAGCTTGAGAAAGCAACAGATAAGTTTAATTCAAAGAGAGTACTGGGAGAAGGAGGATTTGGACGTGTTTATAGTGGGACATTTGAAGATGGGGCTGAAGTTGCTGTTAAGCTGCTAACAAGGGATAGTCATCAGAATGGGGACCGTGAATTTATCGCAGAAGTTGAGATGTTAAGCCGATTGCATCATCGTAATCTAGTGAAACTCCTTGGTATATGCATTGAAGGGCGAAGGCGCTGCCTGGTTTATGAGCTTGTTCCTAATGGCAGTGTTGAGTCCCATCTGCATGGCGATGACAAGAAAATGGGACCTCTAGATTGGGAAGCACGGATGAAAATTGCTCTTGGAGCTGCAAGAGGATTGGCCTATCTTCATGAGGATTCTAATCCTCGTGTAATTCATCGAGACTTTAAAGCTAGCAACGTGTTACTAGAAGATGACTTTACCCCGAAAGTTTCTGATTTTGGGTTGGCAAGAGAAGCAACTGAAGGGAGCAATCATATTTCTACACGGGTGATGGGAACTTTTGGGTATGTTGCTCCAGAATATGCAATGACAGGCCATTTACTAGTTAAAAGTGATGTCTATAGTTATGGCGTTGTCCTGCTTGAACTTCTTACAGGCCGAAAGCCAGTCGACATGTCTCAACCTCAGGGACAGGAGAATCTAGTAACTTGGGCACGGCCACTGTTGACGAGTAGAGAAGGTTTAGAACAGCTAGTGGATCCATCTTTGGCTGGAAGTTATCACTTCGATGACATGGCAAAGGTTGCTGCTATCGCTTCAATGTGTGTTCACCCGGAGGTCACCCACAGACCTTTTATGGGTGAAGTGGTGCAGGCTCTGAAGTTAATATACAATGACACAGATGAGACTGGTGGAGATTGTTATAGTCAGAAGGGATCCTCTGCTCAGGAGTCTGAATTTAGAGGCGACTTTGCCCCATCTGATAGCAGTTGGTGGAACGCCGGAGGGTTAACCCCACGATTAACTTATGGACAAGCATCTTCCTTCATCACAATGGATTATAGTTCTGGTCCACTTGAAGATATGGAAAACAGACCGTTTTCAACTTCAAGCTTGATTGGAGATGAGGTATCTTTACCAATTAGGCATGGGAATAGATCAGGTCCTCTAAGAACAGTCCGAAACAAGCTATCCTTACATAGATTTTCAGGAAGTCGGAGTGAGCACGGGGGAGTTTCTTCCAAGCGTAAATGGAATGATGGTTACTGGGTTTAA 2307 0.4465 MLPLSPPDLLLQIMPASVFLLLLSLLLPSQVKSFSLGLSFASSEQTRTWFVKPSSRPSSAPAPSSIPSSAPAQSPSYQGPRASTTPKHPHRRHHSIRPYVAAPPPSKDQACDQSCTDPLTSTPFGSPCGCVYPMKVRLTLDVAPYAVFPVMTELENEVALGTYLEQSQVKIMGAISDSQNEGRTIVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAAVYIIYPGIQSSPPYGSLTGSGPEEGPHGILPVSANFASKNQKTNLRTIIIIALSSFVLLLVLVGALFITLKWRKTRRPSSAVGPALTSSLNKRSGLGSILSSSITSSTSISLMSTMATSLLSVKTFSLSELEKATDKFNSKRVLGEGGFGRVYSGTFEDGAEVAVKLLTRDSHQNGDREFIAEVEMLSRLHHRNLVKLLGICIEGRRRCLVYELVPNGSVESHLHGDDKKMGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLTSREGLEQLVDPSLAGSYHFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETGGDCYSQKGSSAQESEFRGDFAPSDSSWWNAGGLTPRLTYGQASSFITMDYSSGPLEDMENRPFSTSSLIGDEVSLPIRHGNRSGPLRTVRNKLSLHRFSGSRSEHGGVSSKRKWNDGYWV* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0965 768 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Lja1g0965 768 ProSiteProfiles Protein kinase domain profile. 364 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0965 768 Pfam Protein tyrosine and serine/threonine kinase 366 636 IPR001245 GO:0004672|GO:0006468
Lja1g0965 768 MobiDBLite consensus disorder prediction 51 83 - -
Lja1g0965 768 PANTHER OS01G0750732 PROTEIN 18 765 - -
Lja1g0965 768 Gene3D Transferase(Phosphotransferase) domain 1 441 658 - -
Lja1g0965 768 CDD STKc_IRAK 370 640 - -
Lja1g0965 768 SUPERFAMILY Protein kinase-like (PK-like) 342 640 IPR011009 -
Lja1g0965 768 MobiDBLite consensus disorder prediction 51 114 - -
Lja1g0965 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Lja1g0965 768 Gene3D Phosphorylase Kinase; domain 1 335 440 - -
Lja1g0965 768 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 18 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0965 Lja-Chr1 9566749 9571572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0965 115 754 Receptor kinase-like Gene Family AT5G56890 55.303 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lja1g0965 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0965 - - gmx:100792309 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0965 1 9566749 9571572 Lja1g0965 1 9566749 9571572 ECH
Lja1g0965 1 9566749 9571572 Lja5g2095 5 28473015 28479085 PCT