Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0960 ATGAATGGGGTGCAGAACAGAAGGGTTCACAATGTTGACAAGCCTTTTCCAGGCTGCCTGGGAAGAATGGTTAACCTCTTTGATTTGGCTGGTGGTGTGAACGGGAACAGGCTACTCACCGACAAGCCACACCATGATGTATCTCCACTTTCAAGAAGTCAATCAGATGTTGCGAGGGTCATGAGTCCTTCATTTGGTGATCAGATAGAGGATAAAGTGATTGTTTCCGACTCATTGAGAACATCTTCAAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAGATGTCCAAAGAAGTTGTTTCCAAGCATAATCCACCGAATGTAGTTGCAAAGTTAATGGGGCTTGAAGCCCTCCCACAGGGAAATCATAATTTATCTGTGGAGAGAAGCCATAGGGGAGATTATTCTCAACATATGTGTGGTCATTCAGGGACACCATTCAATCATTGGCAGCTGGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAATTCATCCAGGCACAGAACAGATTGCTTACAAAGATATTTATGAGATATGGCTGCAATCACAGAGAAAAGGTAATGTAAAAGACAAGACACCTGAGAGAGAAAGGTGGCCTGAAGATGTTAATGAGAAGAAAATGGCTCTCATTCGCCAAAAATTCATGGAAGCTAAGCGTCTGTCTACAGATGAGAGACTGCGTCAGTCAAAGGAGTTTGATGATGCCTTGGAAGTTTTAAGCTCCAATAATGATCTATTAATCAAGTTATTGGATTCTCAAAATCTATATGACCTTCAATCTACTCCACTAGCTGAGACAAAGCGTATTACTGTTCTTAAACCTTCGAAGGTGATTGACAATGAAAAGTCTGACAGAAAAGGGAAGAAAAATGACAATCATACTAAGAAACCAGCAAATGTCGGTGCTGCAAGGGAGAAAAATAGTCCTGTATACTCTCAAGCAAGTCAGAATGAATTCCCAGGTCAACCTACTCGAATAGTGGTATTGAAGCCTAGTTCTATGAAGACGCATGAGATTAAGGCTGTGGTTTCTCCGACGGCATCATCACCTCTAAATCTGCAAAGTGGGAATTTCTATCAGGGCCCTGAAGATGAAGATGTGCTGGAATCAAGAGAAGCGGCAACAGAAATTACACAGCAAATGCATGAAAACCTGAGGAGCCATCGAAGGGATGAAACTTTGTATTCTTCGGTATTTTCCAATGGCTATGTTGGTGATGAGAGTTCATTCAACAAATCAGATAATGAGTATACTGCAGGGAATTTTAGTGATTTGGAAGTAATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGTCCTTTTTCTTCATCATCTTTCAGTCGCGCTTCATGTTCTCCTGAGTCATCAGTATGTAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCCAATAAGGGTCATCAGGAACAAAGGCATATGCGGAGAAGCTCTACGTTGGGTGAGATGCTTGCTCTTTCAGAGACAAAGAAATCTTTAATATCTGAGGTTGAAGGGATTAACAAAGAACAAGAAAGCATTGATCAAGAACAAGAACCTTGTGACTCTGTTTCTTGCAGTCGTAATTTCAGTGAAGAAATACATGCAGATGATTCTCCTAAAAGCCTTCCCAGGTCAAAATCTGTCCCTATATCTTCCACTGTCTATGAAAGTGCACTCAACGTTGAAGTTTGTGAGAATGGTGCTGGCAAAGCACATGACTCCAAGGAGCTGACTAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACGAGTTTCTTATTCTCTAGGAATAAGAAATCAACCAAGGAAAAGTCTTGTGTATCTCAGTCTAAGGATGAGTCCCAATCTAATTCTACTGTTGCTGAAACTTCAGTATCTCCAGTAAATTCACCTGAAGTCCTTAGGGATGACGTGTCTCAAAGCTTCAATGGCTCCTTTGGCGAGTGCTCTCTTCCAACTCTGTTTGAATCATCAGCCAAATCTTCATCAGATTCTTTCTCTAATGGACAAGGCGTAATATCTCCAGAGCCAGGATTGACCGTGTCAAAGCCCATGGTGCCCTGGATTTCAAGTGAAAACCAGGATCAGCCGAGTCCAATCTCAGTTTTAGAACCTCCATTTGAGGATGAAAATGTAGCAGCTCATGAGTCCTTATACTGTATGAAGGGTGGTCAGCTTGGATCACGTGTACCTCTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGAACCCTCTCATGGGATGATTCATGTGCAGAGGTAGCTAGTTCATATCCATTAAAGCCTTCGTTGGCTTCCTCAGACACCATGGTAGAGGATCAAGACTTGCTTGTTTTTGTGGAGAAACTACTATCAGCTGCTGGACTTGATGATCAAGTGCAGCCTGATTCATTTTACTCTAGATGGCATTCCCTTGAAAGCCCATTGAATCCATCGTTGAGGGACAAATATGCCAATCTCAATGACAAAGAGCCCCAGCCTCTCCATGAAGCCAAGAGAAGGCAGAGGAGATCTAATCAGAAGCTTGTATTTGATTGTGTCAACCTTACCCTTGTAGAAATCACTGGTTACAAATCAGAAAGTCACTTAATGGGAAGGTTGTGGAGTGGGGACCACAGAGGGCTCCAAGTCACAGAGGGTGCTGCACCTCCCCTATTGGTGGACCTCATTGTGACCCAAATGAAGGACTTGATATCTAGTGGCATGAGGTCTGTTTGGGAAAGCTGTGGGGACAGCAACAGCCTGGTTGTGGATAGTATTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGATTATGGGACTGGAGGTGGATATTTTGGTGAAGGAAGTGGAGGGGAAGTTGCTTGAGGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGGCAGGGTCTGA 2964 0.4271 MNGVQNRRVHNVDKPFPGCLGRMVNLFDLAGGVNGNRLLTDKPHHDVSPLSRSQSDVARVMSPSFGDQIEDKVIVSDSLRTSSNKKINGTPIKMLIDQEMSKEVVSKHNPPNVVAKLMGLEALPQGNHNLSVERSHRGDYSQHMCGHSGTPFNHWQLEDRFMDKEMLHEIHPGTEQIAYKDIYEIWLQSQRKGNVKDKTPERERWPEDVNEKKMALIRQKFMEAKRLSTDERLRQSKEFDDALEVLSSNNDLLIKLLDSQNLYDLQSTPLAETKRITVLKPSKVIDNEKSDRKGKKNDNHTKKPANVGAAREKNSPVYSQASQNEFPGQPTRIVVLKPSSMKTHEIKAVVSPTASSPLNLQSGNFYQGPEDEDVLESREAATEITQQMHENLRSHRRDETLYSSVFSNGYVGDESSFNKSDNEYTAGNFSDLEVMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMANKGHQEQRHMRRSSTLGEMLALSETKKSLISEVEGINKEQESIDQEQEPCDSVSCSRNFSEEIHADDSPKSLPRSKSVPISSTVYESALNVEVCENGAGKAHDSKELTKSKSMKSSFKGKVTSFLFSRNKKSTKEKSCVSQSKDESQSNSTVAETSVSPVNSPEVLRDDVSQSFNGSFGECSLPTLFESSAKSSSDSFSNGQGVISPEPGLTVSKPMVPWISSENQDQPSPISVLEPPFEDENVAAHESLYCMKGGQLGSRVPLKSNLIDKSPPIESIARTLSWDDSCAEVASSYPLKPSLASSDTMVEDQDLLVFVEKLLSAAGLDDQVQPDSFYSRWHSLESPLNPSLRDKYANLNDKEPQPLHEAKRRQRRSNQKLVFDCVNLTLVEITGYKSESHLMGRLWSGDHRGLQVTEGAAPPLLVDLIVTQMKDLISSGMRSVWESCGDSNSLVVDSIVRKEVVGKGWVEIMGLEVDILVKEVEGKLLEELVEDAVVDLTGRV* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0960 987 MobiDBLite consensus disorder prediction 839 858 - -
Lja1g0960 987 Pfam Domain of unknown function (DUF4378) 800 978 IPR025486 -
Lja1g0960 987 MobiDBLite consensus disorder prediction 835 858 - -
Lja1g0960 987 MobiDBLite consensus disorder prediction 284 307 - -
Lja1g0960 987 MobiDBLite consensus disorder prediction 620 650 - -
Lja1g0960 987 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 986 - -
Lja1g0960 987 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 986 - -
Lja1g0960 987 MobiDBLite consensus disorder prediction 627 650 - -
Lja1g0960 987 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Lja1g0960 987 MobiDBLite consensus disorder prediction 284 326 - -
Lja1g0960 987 Pfam DUF761-associated sequence motif 110 127 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0960 Lja-Chr1 9479517 9484903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0960 1 984 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.257 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0960 - - gmx:100816611 1536.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0960 1 9479517 9484903 Lja1g0960 1 9479517 9484903 ECH