Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0943 ATGCCTGTAAACATAACCTCCGTCAAAACTTCCTCCAATGGAGTCTGGCAAGGCGATAACCCTTTGGACTTCGCCTTCCCGCTCCTCATCGTCCAAACCATCATCGTCCTCGTCCTCAGCCGCTCCCTCGCTTTCCTCTTCAAACCTCTCCGACAACCTAAAGTCATTGCTGAAATTGTCGGTGGGATTCTGCTAGGACCATCAGCATTGGGGAGGAGTGAGAGCTACTTGCACCGCATCTTCCCAAAATGGAGCATGCCGACGCTGGAATCGGTGGCCAGCATAGGCCTTCTCTTCTTCCTCTTCCTCGTCGGCCTCGAGCTCGACCTCAACTCAATCCGCCGCAGCGGCCGGAACGCCTTCACAATCGCCGCGGTCGGAATCTCCGCTCCATTCATCGGCGGCATCGGCGTCGCCGTCGTCCTCCGCAAAACCGTCGAAGGCGCCGACAAGGTCGGATTCGGCCAATTCGTCGTCTTCATGGGCGTCGCCCTCTCCATCACAGCATTCCCCGTCCTCGCCCGAATCCTCGCCGAGCTCAAGCTCCTCACCACGCGAGTCGGCGAAACCGCCATGGCCGCCGCCGCGTTCAACGACCTCGCCGCCTGGGTGCTCCTCGCGCTCGCAATCGCGCTGGCAGGTAGCGGCGTCGACGGAGACGGCAAAAGCCCTCTGGTATCCGTCTGGGTGCTCCTCTCCGGCGCCGCCTTCGTCGCCTTCATGATGGTAGTTATCCGGCCAGTCATGACACGCGTCGCGAGGCGGTGCTCCCCTGAAAACGACGTCGTTGACGAGGCTTACATTTGCCTAACCCTCGCCGGCGTGATGGTGTCAGGTTTCATCACAGACATGATCGGAATCCATTCAATTTTCGGGGCGTTTGTGTTCGGATTGACGATTCCGAAGGGTGGGAACTTCGCCGAGAAATTGATGGAGAGAATTGAGGATTTCGTTCTGGGATTGCTGCTTCCGCTTTACTTTGCTTCCAGTGGGTTGAAAACCGATGTGACGAAGATTAGCGGCGGAAAAGCGTGGGGGCTTCTGGTTCTGGTGATTTCGACGGCGTGCGCCGGGAAGATTCTGGGGACGTTCGTGGTGGCCGTGATGTGTAGGATTCCGGTGAGGGAGTCGCTCACGCTTGGTGTGCTCATGAACACCAAGGGACTCGTGGAACTCATTGTGCTCAACATTGGGAAGGAGAAAAAGGTATTAAATGACGAAATATTTGCAATCCTGGTTCTGATGGCTCTAGTGACCACCTTCATGACAACCCCAATAGTGATGGCCATATACAAACCAGCTCGTGGCATCATATCCAAGACATGTCGCAAGCTGGGTGACCTCTCCACCCACTCAATGGACCAAAAGGAGGCGGCCCAGCTCCGAGTCATGGCCTGCATCCACGGCCCAAGCAACATCCCCTCCATCATCGGCCTCATCGAATCAACCCGCGGCACCAGCAACTCCCTCCTCAAGCTCTTCATCATGCACCTCGTCGAGCTCACAGAACGCTCATCATCCATCATGATGGTCCAACGCGTTCGTAGGAACGGTTTCCCCTTCTTCAATCGGTTCAATCGTGGCGAGTGGTACAACCGGCTCGCCGGAGCCTTCCAAGCCTACAGTCAACTGGGCCGGGTCCAAGTTCGGTCCACTACCGCGATCTCCTCTCTCTCCACCATCCACGAGGACGTTTGCCACGTGGCGGAGGAGAAGAGGGTCACGATGATCGTCTTGGTGTTCCACAAACAGTGGAGGGTGGAAGCTGACGAGGACCACGACAAGGGTCATGAGGTGGTGGAGAATGTTGGACACGAGTGGAGAGGGGTGAATCAGAGGATTCTTAAGGACGCGCCTTGCTCTGTGGCTGTGCTCGTTGACCGAGGGTTTGGGTCCAAGACTTTGGGCCCAAATGCCACAGAGGCCCAACGAATCGGGATTGTGTTCTTTGGTGGGCCTGATGATCGAGAGGCGCTGGAGTTAGGGAAGAAAATGACTGATCACCCAACAGTTGAAGTGACTGTTGTGAGGTTCGTTGAAAGAGATGGGGAAGCTGACAACATTGTGCTGCGCCAATCACCCCACAGAAGTACTGATGATAGCTACAGCTTCTCAACGGCTAAAATGAACCGCCAGAAGGAAAAAGAGTCGGATGAGAATGCGATCGAGGAGTTTCAAAGTGTGAGGGAAGGGAAGGTGAAGTATATTGAGAAAGTTTGCGGCAACATCGTGGAGGAGGTGTTGGCTATAGGAGAAAGTGGGGATTACGATCTCATAATTGTTGGAAAGGGTCGGTTTCCATCCACTATGGTGGCAGAACTTGCAGAGAGGCACGCGGAGTACGCGGAGCTAGGCCCTGTCGGAGATATTCTAGCATCATCAACGGGACACAAGATGAGGTCATCGGTGTTAGTTATTCAACAACATGATGTTGCGTTGATGGATGAGGCCCCTATGTACAAGGTCAAGGTGCATGATGAAAATATTGTTGATAATTCATCTTCCAAGGGAGAAATTTCAATAGCCATCGATAACGATGTGTGA 2544 0.5456 MPVNITSVKTSSNGVWQGDNPLDFAFPLLIVQTIIVLVLSRSLAFLFKPLRQPKVIAEIVGGILLGPSALGRSESYLHRIFPKWSMPTLESVASIGLLFFLFLVGLELDLNSIRRSGRNAFTIAAVGISAPFIGGIGVAVVLRKTVEGADKVGFGQFVVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDLAAWVLLALAIALAGSGVDGDGKSPLVSVWVLLSGAAFVAFMMVVIRPVMTRVARRCSPENDVVDEAYICLTLAGVMVSGFITDMIGIHSIFGAFVFGLTIPKGGNFAEKLMERIEDFVLGLLLPLYFASSGLKTDVTKISGGKAWGLLVLVISTACAGKILGTFVVAVMCRIPVRESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALVTTFMTTPIVMAIYKPARGIISKTCRKLGDLSTHSMDQKEAAQLRVMACIHGPSNIPSIIGLIESTRGTSNSLLKLFIMHLVELTERSSSIMMVQRVRRNGFPFFNRFNRGEWYNRLAGAFQAYSQLGRVQVRSTTAISSLSTIHEDVCHVAEEKRVTMIVLVFHKQWRVEADEDHDKGHEVVENVGHEWRGVNQRILKDAPCSVAVLVDRGFGSKTLGPNATEAQRIGIVFFGGPDDREALELGKKMTDHPTVEVTVVRFVERDGEADNIVLRQSPHRSTDDSYSFSTAKMNRQKEKESDENAIEEFQSVREGKVKYIEKVCGNIVEEVLAIGESGDYDLIIVGKGRFPSTMVAELAERHAEYAELGPVGDILASSTGHKMRSSVLVIQQHDVALMDEAPMYKVKVHDENIVDNSSSKGEISIAIDNDV* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0943 847 Pfam Sodium/hydrogen exchanger family 34 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja1g0943 847 Gene3D - 28 435 IPR038770 -
Lja1g0943 847 PANTHER CATION/H + ANTIPORTER 3 823 - -
Lja1g0943 847 PANTHER BNAC06G14930D PROTEIN 3 823 - -
Lja1g0943 847 Gene3D - 526 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0943 Lja-Chr1 9284720 9291153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0943 75 822 Antiporter Super Family AT3G53720 64.482 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0943 - - lja:Lj1g3v4551150.1 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0943 1 9284720 9291153 Lja1g0943 1 9284720 9291153 ECH