Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0942 ATGCACAACACAACATCGTCTGATGGAGCCTGGCAGGGCGATAATCCTTTGAACCACCCTCTTCCACTCTTAATCATTCAAATCACTTTAGTCCTTTTCGTCAGCCGCATCCTTTCCTTCTTCCTCAAACCCCTTCGTCAACCCAAAGTTGTTGCCGAAATCATTGGTGGAATTTTGCTAGGACCTTCTGGTATTGGGCGCAACAAGACTTTCATGAACACAGTGTTCCCTTCATGGAGCACTCCCATTCTTGAATCAGTAGCCAGCATTGGCCTCATCTTCTACCTCTTCCTAGTGGGAGTCGAGCTCGACCTCCGCACCATCGGCCGCAGCGGCAGGCAAGCCTTCAACATAGCCGCCGCGGGAATATCCCTCCCCTTTATCTTCGCCATTGGAGTCACCTTCCTCCTCCAACGCGCCATCCGTACCGAGACCAACGTGGAGGTTGGATACATCCAGCTCTTCATCTTCTTAGGTGTCTCTCTCTCCATCACCGCCTTCCCTGTCCTCGCACGCATCCTAGCAGAGCTCAAGCTGCTCACAACACACGTCGGAGAAACCGCCATGGCCGCTGCCGCCTTCAACGATGTCGCCGCGTGGGTTTTGTTAGCACTTGCGGTGGCCTTAGCTGGTGGCGGACACAAAAACAGTGTCCTCACATCAATACTGGTGCTCTTCTCAGGAGTTGCTTTTGTTGCATTCATGATGTTAGCGGTTCGACCGATGATGGATCGTGTTGCGCAGCGGTGTTCACGGGAGGAGTATGACGTGATTGACGAAATGTACATTTGTTTGACGCTTGCTGGGGTGATGTTGTGTGCGTTTGTGACAGATTTAATAGGGATACACTCAATTTTCGGGGCGTTTGTTTTTGGGCTGACTATACCGCAAGGGGGTGAGTTTGCAAGTAGGGTAACAAAGAGGATTGAGGATTTTGTTTCGACATTGTTGCTTCCTCTGTATTTCGCATCGAGTGGGTTGAAAACGGACGTGGCTAAGTTGCACGGTGTAGTGGCATGGGGGCTACTCTTGGTGGTTATAGCAACAGCGTGCGTTGGGAAGATTTTGGGGACATTTGCGGTAGCGATGATGTGCACAATTCCGGTGAGGGAGTCGTTGACACTTGGAGTTTTGATGAATACTAAAGGCTTGGTTGAGCTTATCGTTCTCAATATTGGCAAAGAAAAGAAGGTCCTCAACGACGAGATGTTTACAATCCTAGTGCTCATGGCTCTCTTTACCACCTTCATCACAACTCCAGCAGTGGCTGCAATATATAAACCTTCTCGTTCTGCTAATTCCCTCATCCACCTTCGCAGGATGCCAAAACCACCACCACTGACAGACACAGAAGAGAAGCTTCGCATTCTTGCATGCATCCATGGAACTGGAAACATTCCCTCACTCATCAGCTTCATCGAACCGGTTCGAGCCACCACCACTTCCAAGCTCAAACTCTACGTTATGCAGCTCACTGAACTCACTGACAGCTCATCCTCCATCTTAATGGTCCTACGCAGTCGAAAGAGTGGTTTCCCCTTCATCAACCGATTCCAAAGAAACACAACGCATGAGCAAATTGCCACTGCATTCCAAGCTTATGGCCATGTGGGGCAAGTCACAGTGCATCACTTGACATCCATCTCATCATTGGCTACAATCCATGAAGACATATGCCATGTTGCAAAGGAGAAATGTGTCGCAATGATCTTATTGCCCTTTCACAAAAGGTGGAGAGGGGAAGATGAAGAAACAGTTGAAAACATAGGGCAGGGATGGAGAGAAGTCAATCAGAGGGTGCTTCAAAATGCACCTTGCTCTGTTGCAGTACTTGTTAATCGCGGTGTGGGGAGAAGATACCAACAAGGAGCAGTGACTAATGTTTCTTCAGGGAAGAGGGTGTGCATGATTTTCATTGGTGGGCCGGATGATCGTAAGGCTTTGGAGTTGGGAAGTAGGATGGCAGAGCATCCAGCAATTAGGTTGTCTCTTGTGAGATTCACTTCAGACAGGGAAGCAAAGGAAGAGGGACAAAACTGCAACTCATCAACATCAGCTAACAATTGGGAAGAAGAGAAGATGTTGGATGAAGTGGCAATAAGCGAGTTCAAAACTAAATGGCTAGGTGCAGTGGAGTACATTGAAAAGGACACATGCAACATAGCAGAGGAGGTGGTGACAATTGGGAAGGGTAAGGAGTACGAGTTCATAATTGTGGGGAAGGGGCAACAGATTCTTGAGTCAACCATGATGCTAAACATACAGGATTCTCGTCTGGAACATGCTGAGCTAGGGCCTGTTGGAGATCTGTTAACTTCATCAGGTCAAGGCATTACGAGTTCAGTGCTAGTTATACAGGATCATCATTTGAAAAATTCAAACGAAACTACAATCAGAGAGACAGCAAGTGCCAATAGTACTGTGATTAACACTACTATATCAGAAATTGAATCATCCGTATAA 2463 0.4771 MHNTTSSDGAWQGDNPLNHPLPLLIIQITLVLFVSRILSFFLKPLRQPKVVAEIIGGILLGPSGIGRNKTFMNTVFPSWSTPILESVASIGLIFYLFLVGVELDLRTIGRSGRQAFNIAAAGISLPFIFAIGVTFLLQRAIRTETNVEVGYIQLFIFLGVSLSITAFPVLARILAELKLLTTHVGETAMAAAAFNDVAAWVLLALAVALAGGGHKNSVLTSILVLFSGVAFVAFMMLAVRPMMDRVAQRCSREEYDVIDEMYICLTLAGVMLCAFVTDLIGIHSIFGAFVFGLTIPQGGEFASRVTKRIEDFVSTLLLPLYFASSGLKTDVAKLHGVVAWGLLLVVIATACVGKILGTFAVAMMCTIPVRESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFTILVLMALFTTFITTPAVAAIYKPSRSANSLIHLRRMPKPPPLTDTEEKLRILACIHGTGNIPSLISFIEPVRATTTSKLKLYVMQLTELTDSSSSILMVLRSRKSGFPFINRFQRNTTHEQIATAFQAYGHVGQVTVHHLTSISSLATIHEDICHVAKEKCVAMILLPFHKRWRGEDEETVENIGQGWREVNQRVLQNAPCSVAVLVNRGVGRRYQQGAVTNVSSGKRVCMIFIGGPDDRKALELGSRMAEHPAIRLSLVRFTSDREAKEEGQNCNSSTSANNWEEEKMLDEVAISEFKTKWLGAVEYIEKDTCNIAEEVVTIGKGKEYEFIIVGKGQQILESTMMLNIQDSRLEHAELGPVGDLLTSSGQGITSSVLVIQDHHLKNSNETTIRETASANSTVINTTISEIESSV* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0942 820 Gene3D - 23 434 IPR038770 -
Lja1g0942 820 Gene3D - 486 767 - -
Lja1g0942 820 Pfam Sodium/hydrogen exchanger family 28 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja1g0942 820 PANTHER CATION/H+ EXCHANGER 3 3 804 - -
Lja1g0942 820 PANTHER CATION/H + ANTIPORTER 3 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0942 Lja-Chr1 9250961 9255462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0942 71 810 Antiporter Super Family AT3G53720 55.512 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0942 - - gmx:100799165 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0942 1 9250961 9255462 Lja1g0942 1 9250961 9255462 ECH