Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0934 ATGACTTCGTTTTTGAAACCTGAAAACGCCCTGAAAAGGGCGGAAGAGCTGATCAATGTGGGGCAGAAGCAGGATGCTTTGCAGACCCTCCATGATGTTATTACTTCGAAGAGATATAGGGCTTGGCAGAAGACCCTTGAGAGGATTATGTTCAAGTATGTTGAACTGTGCGTGGAGCTGCGCAAAGGGAGGTTTGCGAAGGATGGGCTTATCCAATATCGTATCATATGTCAGCAAGTGAATGTTAGCTCGCTGGAGGAGGTTATCAAACATTTCATGCACTTGTCGACTGAGAAAGCTGAACAAGCCCGTAGCCAGGCCCAGGCATTGGAAGAAGCGCTTGATGTTGATGATCTGGAGGCTGATAAGAGGCCTGAGGACTTGATGCTAAGCTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGATCGGGAGCTTGTCACCCCTTGGTTTAAATTTCTGTGGGAAACTTACAGGACAGTGCTTGAAATATTACGGAACAACTCAAAATTGGAAGCCTTGTATGCTATGACAGCCCATCGAGCTTTCCAGTTTTGTAAGCAATATAAACGTACGACAGAATTTCGAAGACTTTGTGAAATTATAAGAAACCATTTGGCCAATCTTAATAAATATCGGGATCAACGAGACCGTCCTGATCTTTCTATTCCTGAAAGCTTGCAACTTTATCTTGACACCAGATTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTTCGATCAGTGGAAGATATCCACGGTCTAATGTGCATGGTCAAGAAAGTGCCCAAGGCATCCTTGATGGCTATTTACTATGTTAAGCTGACAGAAATATTTTGGGTATCATCAAGTCATCTGTATCATGCGTATGCATGGTTCAGGCTCTTTTTATTACAAAAGAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTGTTAGCTTCATCTGTTGTTCTGGCTGCTCTCTCAGTGCCTCCTCATGATCACACTCATGGTGCATCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGGATGTCTAATCTCATTGGCTTTAATCTTGAAAACAAACCGGAGAGCAGAGAAGTGCTCTCAAGATCATCACTTCTTGCTGAACTGGCTTCGAAGGGTGTGATGTCATGTGTAACACAGGAAGTGAAGGACATTCACTATCTTTTGGAGCATGAATTTCTCCCTTCAGATCTTGCACAGAAAGTGCTGCCCTTGTTAACTAAATTCTCAAAACTAGGTGGTAAGCTTTCCACTGCTTCATCCATTCCAGAAGTGCATTTGTCACAGTATGTTCCGGCACTGGAAAAACTAGCGACCTTGAGGTTGCTACAGCAGGTTTCTAATGTGTACCAGACTATGAAGATTGAGACTTTATCTGGGATGATCCCCTTCTTTGAATTTTCTGTGGTGGAAAAGATTTCTGTGGATGCTGTTAAGCAGAAGTTTGTATCAATGAAAGTTGACCACATGAAAAATGTTGTAATTTTTTGTAAAATGAGTCTTGAGTCTGATGGCTTAAGAGACCACTTGGCCAATTTTGCTGAGCGATTGAATAAGGCTAGACAAATGATTTATCCTCCTGATAGGAAACCATCAAAACTTGGAGCTTTGCTTCCGACTTTGACTGAAGTCGTGGCCAAAGAGCACAAAAGGCTCCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAGCAAGAACGACAGCTTCTTGAAATGGAGCGTGAGGAGGAATCGAAGAGATTAAGACTGCAGAAAATAACAGAAGAGGCAGAACAAAGAAGGCTTGCGACTGAGTATGAGCAGAGGAAGAATCAAAGGATCCTTAGGGAGATAGAGGAAAGAGAAAATGAAGAAGCTCAAGCTTTACTTCAGGAAGCTGAAAAACGTATCAAAAAAAGGGGGAAAAAGCCAATGATTGAGGGGGAAAAAATTACCAAGCAGACATTGATGGAGTTGACTTTGACTGAACAACTCCGTGAAAGGCAGGAAATGGAAAAGAAGCTGCAAAAACTTGCTAAAACCATGGATCATTTGGAAAGAGCCAAAAGAGAAGAAGCTGCTCCGCTTATTGAAGCTGCATATCAACAGCGCCTAGTAGAAGAGAGGGTTCTTCATGAGCGTGAGCAACAACTAGAGGTTGAAGTAAGCAGACAGCGGCATGAGGGAGATCTTATTGAGAAGGAGAGGCTTTCTCGAATGATGGGCAGTAAAGAGATATATCAAGAGAGAGTTGTCAATCAGCGCCAAGCAGAATTTAACAGATTGAATAGAGAAAGGGAGGAGCGGCTCTCTAAGATTTTACAAACCAGGAGGCAGGATAGGGAGAAAGCGAGGAAGTTGAAGTACTATCTTCAGGTAGAAGAAGAGAGACAACAAAAATTGCGTGAGGAGGAAGAGGCTAGGAAGCGTGAAGAGGCTGAGAGGAAAAAGAAGGAAGAGGCTGAACGCTTAGCAAAATTAGCTGAGATTAGTGAAAAACAGAGGCAGAGAGAGCGGGAGCTTGAAGAAAAAGAGAGGCAGAGGAAGGAAGCATTGTTGGGCAGACCAACCGAACCAGTTCTTAAGCCCGCTGAGCCTCCTGCTCGACCGTTGGAATCTGCACCTGCTGCAGCAGCTGCCGTTGCAAACCCAGGGAGATATGTTCCCAGACACCGACGCCAAGGAGGTGAACCTGCAGCCGCTGCCGCTGCTGCTCCTCCTCCTCCGGAAACAGATCGTTGGAATAACAGTAGCAGCCGGCCGGATGGTGACAGGTGGCGCAGTGAGGATCGCAGAACCTCCTTTGGTTCTGGTGCTCCAAAGTCATCCACCACATGGTCATCTTCCAGGAATCGTGATCGTTGA 2883 0.4447 MTSFLKPENALKRAEELINVGQKQDALQTLHDVITSKRYRAWQKTLERIMFKYVELCVELRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSIPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCMVKKVPKASLMAIYYVKLTEIFWVSSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLLASSVVLAALSVPPHDHTHGASHLELEHEKERNLRMSNLIGFNLENKPESREVLSRSSLLAELASKGVMSCVTQEVKDIHYLLEHEFLPSDLAQKVLPLLTKFSKLGGKLSTASSIPEVHLSQYVPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFEFSVVEKISVDAVKQKFVSMKVDHMKNVVIFCKMSLESDGLRDHLANFAERLNKARQMIYPPDRKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEERENEEAQALLQEAEKRIKKRGKKPMIEGEKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDHLERAKREEAAPLIEAAYQQRLVEERVLHEREQQLEVEVSRQRHEGDLIEKERLSRMMGSKEIYQERVVNQRQAEFNRLNREREERLSKILQTRRQDREKARKLKYYLQVEEERQQKLREEEEARKREEAERKKKEEAERLAKLAEISEKQRQRERELEEKERQRKEALLGRPTEPVLKPAEPPARPLESAPAAAAAVANPGRYVPRHRRQGGEPAAAAAAAPPPPETDRWNNSSSRPDGDRWRSEDRRTSFGSGAPKSSTTWSSSRNRDR* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0934 960 Gene3D UVR domain 217 267 - -
Lja1g0934 960 MobiDBLite consensus disorder prediction 923 940 - -
Lja1g0934 960 MobiDBLite consensus disorder prediction 806 861 - -
Lja1g0934 960 Gene3D - 268 342 - -
Lja1g0934 960 Gene3D - 351 510 - -
Lja1g0934 960 Coils Coil 615 649 - -
Lja1g0934 960 Pfam PCI domain 373 508 IPR000717 -
Lja1g0934 960 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lja1g0934 960 Coils Coil 796 856 - -
Lja1g0934 960 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 905 - -
Lja1g0934 960 MobiDBLite consensus disorder prediction 806 960 - -
Lja1g0934 960 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Lja1g0934 960 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 905 IPR027512 GO:0005852
Lja1g0934 960 Coils Coil 667 697 - -
Lja1g0934 960 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 933 IPR027512 GO:0005852
Lja1g0934 960 Coils Coil 561 602 - -
Lja1g0934 960 SMART PINT_4 441 532 IPR000717 -
Lja1g0934 960 Coils Coil 93 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0934 1 949 Eukaryotic Initiation Factors Gene Family AT4G11420 70.761 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0934 K03254 - gmx:100782598 1439.09