Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0926 ATGGACGGTTATAGTCCAAAATGGTTTCATAAAGCGAAGCCATTCATAGGTGTTGTGTTCATTCAATCTGGATACGCAGGTATGGATGTTCTGTGCAAGGCTGCATTGAACAATGGAATGAGCAATTATGTTCTTGTTGTCTACCGTCACGCTGTTGCCTTTGTTGTCATGGTTCCTTTTGCATTGATCTTGGACAAGAAAATAAGGCCGAAGATGACATTTTCAATCTTTGTGAAGATAGTGTTACTGAGCTTGTTAGAGCCAGTTATTGATCAGAATCTGTATTATTTGGGAATGAAGTACACAACAGCAACCTTTGCAGTTTCCATGTACAATATCCTTCCTGCCATCACTTTCCTCATGGCTTACATTCTTAAGCTAGAGAAGATAAAAATAAAAAGTATACGTAGTCAAGCAAAGGTGTTTGGGACTTTAGCCACTGTTGCAGGTGCCATGGTGATGACACTAATAAAAGGCCCTGAACTTGAGCTTTTTGGGACTCATGGAGGAAGCAGTACCCACATCCAGCATAATGGTGGGGTAAACCTTCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGGTGCTTTAGTTTTGCAGGTTTCATGATTCTCCAAGCTATTACCCTTGAAGCCTACCCTGCTGATCTCTCTCTCACAGCATGGATATGTTTGTTGGGAACAGTTGAAGGTGGCATAGTTGCCCTGGTTATGGAAAGGGGTAACCCTGCTCCAGTTTGGTCTTTGAATTGGAATACAAGTTTGTTGGCTGCTGTCTACGGTGGCATAGTTTGCTCTGGAATGACTTATTACATCCAAGGAGCAGTGATGAAATACAAAGGCCCAGTCTTTGTAACAACATTCAGTCCTCTATGCATGATCATTGTGGCTATACTGGGCTCTTTTATTTTGGCTGAGCAAATGTATCTTGGAAGGGTGATTGGAGCCATTGTCATTCTTTTAGGGTTGTATCTAGTGGTGTGGGGTAAAAACAAAGATTATGACTCACCACCAAGTCCAATTATTAACGAGCATGTATTGCCAGATAAGCAAACTACAGAGAGCAATGCCAAGGACAAGGAGAAGCCTTCTAATCACGAGCTTATCACTATTAGTAACATTGGTGCAGGAAACTTAGCTCAATATGAACAAGTATGA 1161 0.4143 MDGYSPKWFHKAKPFIGVVFIQSGYAGMDVLCKAALNNGMSNYVLVVYRHAVAFVVMVPFALILDKKIRPKMTFSIFVKIVLLSLLEPVIDQNLYYLGMKYTTATFAVSMYNILPAITFLMAYILKLEKIKIKSIRSQAKVFGTLATVAGAMVMTLIKGPELELFGTHGGSSTHIQHNGGVNLQHAIKGSVMITIGCFSFAGFMILQAITLEAYPADLSLTAWICLLGTVEGGIVALVMERGNPAPVWSLNWNTSLLAAVYGGIVCSGMTYYIQGAVMKYKGPVFVTTFSPLCMIIVAILGSFILAEQMYLGRVIGAIVILLGLYLVVWGKNKDYDSPPSPIINEHVLPDKQTTESNAKDKEKPSNHELITISNIGAGNLAQYEQV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0926 386 PANTHER WAT1-RELATED PROTEIN 9 356 IPR030184 GO:0016021|GO:0022857
Lja1g0926 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Lja1g0926 386 PANTHER WAT1-RELATED PROTEIN 9 356 - -
Lja1g0926 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 333 - -
Lja1g0926 386 Pfam EamA-like transporter family 188 328 IPR000620 GO:0016020|GO:0016021
Lja1g0926 386 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0926 Lja-Chr1 9119947 9123116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0926 10 386 Nodulin-like Gene Family AT2G37460 62.334 9.81e-170 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0926 - - gmx:100777050 577.785