Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0925 ATGGAAGGTTATAGTCCAAAATGGTTTCATAAAGCCAAGCCATTCATATGTGTCGTGTTCATTCAATCTGGATATGCAGGTATGGATGTTCTGTGCAAGGCTGCATTGAACAATGGAATGAGCAATTATGTTCTTGTTGTCTACCGTCATGTTGTTGCCTTTGTTGTCATGGCTCCTTTTGCATTGATCTTGGACAAGAACATAAGGCCAAAGATGACATTTTCAATCTTTGTGAAGATAGTGGCACTGAGCTTGTTAGAGCCAGTTATTGCTCAGAATCTGTATTTTTTGGGAATGAAGTACACAACAGCAACCTTTGCAGTTTCCATGTACAATATCCTTCCTGCCATCACTTTCCTCATGGCTTACATTCTTAAGCTTGAGAAGATAAAAATAAAAAGTATACGTAGTCAAGCAAAGGTGTTTGGAACTTTAGCCACGGTTGCAGGTGCCATGGTGATGACACTAATAAAAGGTCCTGAACTTGAGCTTTTTGGGACTCATGGAGAAAGCAATACCCACATCCAGCATAATGGTGGGGTAAATCTTCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCCTTGGTGGTGCAGGTTTCATGATTCTCCAAGCTATTACCCTTGAAGCCTACCCTGCTGATCTCTCTCTCACAGCATGGATATGTTTGTTGGGAGCAATTGAAGGTGGCATAGTGGGCCTGGTCATGGAAAGGGGTAACCCTGCTCCAGTTTGGTCTTTGAATGAGGATACAAAATTGTTGGCTGCTGTCTACAGTGAAAGTTTTTTAATGTTATACTCCGATACAGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGCAGTGATGAAATACAAAGGCCCAGTCTTTGTAACAGCATTCAATCCTCTATGCATGGTCATTGTGGCTATATTGGGCTCTTTTTGTTTGGCTGAGCAAATGTATCTTGGAAGGGTGATTGGAGCCATTGTCATTCTTTTAGGGTTGTATCTAGTGGTGTGGGGTAAAAATAAAGATTATGACTCACCACCAAGTCCAATTATTAACGAGCATGTATTGCCAGATAAGCAAACTACAGAGAGCAATGCCAAGGACAAGGAGAAGCCTTCTAATCACGAGCTTATCACTATTAGTAACATTGGTGCAGGAAACTTAGCTCAATATGAACAAGTATGA 1191 0.4123 MEGYSPKWFHKAKPFICVVFIQSGYAGMDVLCKAALNNGMSNYVLVVYRHVVAFVVMAPFALILDKNIRPKMTFSIFVKIVALSLLEPVIAQNLYFLGMKYTTATFAVSMYNILPAITFLMAYILKLEKIKIKSIRSQAKVFGTLATVAGAMVMTLIKGPELELFGTHGESNTHIQHNGGVNLQHAIKGSVMITIGCLGGAGFMILQAITLEAYPADLSLTAWICLLGAIEGGIVGLVMERGNPAPVWSLNEDTKLLAAVYSESFLMLYSDTGIVCSGMAYYIQGAVMKYKGPVFVTAFNPLCMVIVAILGSFCLAEQMYLGRVIGAIVILLGLYLVVWGKNKDYDSPPSPIINEHVLPDKQTTESNAKDKEKPSNHELITISNIGAGNLAQYEQV* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0925 396 Pfam EamA-like transporter family 21 154 IPR000620 GO:0016020|GO:0016021
Lja1g0925 396 Pfam EamA-like transporter family 191 338 IPR000620 GO:0016020|GO:0016021
Lja1g0925 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 268 343 - -
Lja1g0925 396 PANTHER WAT1-RELATED PROTEIN 9 366 IPR030184 GO:0016021|GO:0022857
Lja1g0925 396 PANTHER WAT1-RELATED PROTEIN 9 366 - -
Lja1g0925 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0925 Lja-Chr1 9114394 9117831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0925 10 396 Nodulin-like Gene Family AT2G37460 59.536 8.02e-159 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0925 - - gmx:100777050 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0925 1 9114394 9117831 Lja5g2752 5 54506469 54509254 PCT