Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0924 ATGGGTTATAACAAAATGAAGTTTGATAGAGTGAAGCCATTTGTAGGTGTGTTGTTCATACAAACTGCATATGCTGGCATGGATGTTCTGTCAAAGGTTGCACTAAACGAAGGAATGAGCGTCTATGTATATGTTTTCTACTGCAATGCTGTTGCCTTCATTGTCACGCTCCCATTTGCAATATTTTTCGAGAAGAACGTAAGGCCCAAGATGACATTTCCAATCTTTATAAAGATAGTGGCCCTCGGCTTGCTTGAGCCAGTTATTACCCGAAATTTTTATTTTTCTGGAATGAAGTACACAACGGCAACTTATGCTGTTGCCATGGCCAATATCCTTCCTGCCACCACCTTTATCATGGCTTGCATTCTTAAGCTTGAGATGATAAAATTTAGTAGTATACGTGGTCAAGCAAAGGTGGTTGGGACTTTAGTCTCTATTACAGGTGCATTGGTCATGACACTTATTAAAGGCCCGGTGCTTAAGCTTTTCGGGACACACCGCGACGATAGCAACAGCCACGACGAGCATGTTGATGGTGGTTTAAATGTTCATCAAGCAGTAAAAGGATCAGTGATGATCTTAACTGGATGCATTTGTTGGTCTTGTTTCATAATTCTCCAATCTACTACCCTTGAAGTCTACCGTGCTGAGCTCTCTCTTTCGGCATTGATGTGCCTATCTGCAACAACTGGAGCGGGCATATTGGCCCTGGTTATGGAAAGAGGCAATCCATTGGCTTGGTCTCTGAATTGGGATTCAAAACTTCTAGTTGTTGTCTACAGTGGCTTAGTTTGCTCAGGAATGGTTTATTACGTTCAAGGAATAGTGATGAAATATAGAGGCCCAGTGTTTGTAACATCTTTTGAGCCACTGTGCATGATCTTTGTGGCTATCTTGGGATCCATCTTTTTGGCGGAGCAACTGACTCTTGGAAGGATGATCGGCGCCATTGTCATTATTATATGTATCTAG 975 0.4215 MGYNKMKFDRVKPFVGVLFIQTAYAGMDVLSKVALNEGMSVYVYVFYCNAVAFIVTLPFAIFFEKNVRPKMTFPIFIKIVALGLLEPVITRNFYFSGMKYTTATYAVAMANILPATTFIMACILKLEMIKFSSIRGQAKVVGTLVSITGALVMTLIKGPVLKLFGTHRDDSNSHDEHVDGGLNVHQAVKGSVMILTGCICWSCFIILQSTTLEVYRAELSLSALMCLSATTGAGILALVMERGNPLAWSLNWDSKLLVVVYSGLVCSGMVYYVQGIVMKYRGPVFVTSFEPLCMIFVAILGSIFLAEQLTLGRMIGAIVIIICI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0924 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 323 - -
Lja1g0924 324 PANTHER WAT1-RELATED PROTEIN 9 322 IPR030184 GO:0016021|GO:0022857
Lja1g0924 324 PANTHER WAT1-RELATED PROTEIN 9 322 - -
Lja1g0924 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
Lja1g0924 324 Pfam EamA-like transporter family 189 322 IPR000620 GO:0016020|GO:0016021
Lja1g0924 324 Pfam EamA-like transporter family 21 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0924 Lja-Chr1 9102860 9105856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0924 9 320 Nodulin-like Gene Family AT2G37460 55.449 6.24e-123 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0924 - - gmx:100777050 412.535