Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0917 ATGTATTTAAAAAAGAAAAATGAGAAAGAAAATATAAAACGATCTGATATATACCGACAAAGTATATTTATTTCATTTGTGCATGGAAGCAAGCAGGTTCGTAGAGACAGGAAGCTTCAGAGGTTTCCTTCTGAGTCTGATTTTCGCGGTGGTGGAGTTGCAGATATATATTCGAACTCGTTTCAATTGGGGTCGAGGTCGAGATCTTCCACAGAACGGTTCGGAACACCCATTAAGAAGTTATTAGCTGCGGAGATGACTGGTGAAACTGATTCCAAAAGAAGAGCCCCTGGTGTTGTTGCCAGACTAATGGGTCTTGATGGTCCTCCTTTGCAGTTGACTAAGGAACATAAGGGTTCCTCTGAGAACCATCTGAAGAGGACAGAACAAGTGGGGAAAACGGGAAGCAGTGCTGAATTATATGATGGTGGGTCATCTAGGAGGAGCTCAAAGGATCAAATGGAGTGTAAGGATGTATATGAGGTCTCGGAGATTGCAAAGGTAGAGAGCGGTAGGTTCTCATCACAGCCAAAGAGGTCTGCAGACTTGAAGAGCACTGATGCTGAAATGTCATTCAGTGACAACAAGTTCATGGATGCCAAGCGCTTAGCAACTTATCAGGATCTACAGTATTCGCAGGATTCCCATGATGCACTTGGGATTCTAGACTCTGACAATGGTCTTCTGCATGAATACTCCAAGCGGCCAGATTCGTTGTTTAAAAAGCATCTTGATAATCAGCAGGCTTCCCCTCTCCAATCCAATTCTGGTCCCAGAGAAGCTAAGAAATTGTCAGCTATAGAGAATTTTGAACTCTGCGACTTCAGCTGGAAGTCAGATAGGGAGATGATAGGGTTGAATTACAATAGCTCTCGTGAGAAGCATCATGATGGTTTTACTTGCGGCTTTGATAGAAGACATGCGATGCATAGTTTACCAAAGTCATCCAAGCTTCAGTTTAAGGGAATTGATGAACCTGTTGCAGCCCCGACAAGGATTGTTATTCTAAAGCCTAATCTCGGAAAAGTGCAGAGGGCTACCAAAATTGTTTCAACACCTCGTTCTTCTGATGCTTTTCAGTCACAGTGGGAAAAGCGTGCTGAATTTCCAGATGTCAGATTTAGGGACATTGAAATGAGTCAAAAGAAAAGTTTGGGTAGTACTGCCAGGCATTCAAGGAACAAATCTTTGGAATATAGAAAAGTTGCAAAGGAAATCACTAGCCAAATTAAAAATAATTTGGATAATGGCTCCATGGTATTTTCATCTTCTAGACTTAGAGGATATACTTGGGACGATAGCTCATGCGATTTTTCTGGGATTGAATCTCCAGAGAAGTCAGATGTAACAACTGCAACTTTGGGAAATCCGTCTGATAAAAGTAATACTCCCAGGCCATCTCCCCGTTGTAGTGAATCATCTGTGAGTAGAGAGGCGAAGAAGAGACTATCAGAGAGGTGGAAAATGTCTCAACAAGGCCGATCCATCTGCAGGAGCAGCACACTGGCTGAAATGCTTGCTGTCCCTGACAAGGAAACAAAAGCAGCTATTGTTGACAGCATCTCTAATGGAAAAAGCTTCCATGATAAACTTGCCAGCAATGGTAAACCTGCTGGGTGGGTTGAGCCAGTCGGTATCAGCAGCAGAGATGGTTGGAAGGATGGGTTTATTGACAGTTTACCAAGGTCTAAGTCTCTTCCTGCCTCATCTACTCCATTTGGAAGTCCAAGAACATTCTTGCGCCATGAAGCACTTCGTGATGATCGACACATGACACCAATAAAATGGGAAAGGAAGAAGGTGGTGAAATGTCTTGATCACAGACAGTGTGTGAATACCAGACGCTCAAAATCTGGTCACAAGAAGTCTTGGCCTTCTTATTCCTCAAACATAGAAGGTGATGCGTCGTCTTCACCAGACATAAGTTCTATCCACAATAAAGTGAAGATCAATCTTGAAGAGGATTTGCCCAAGCAAGAAGTTCTAGCCATTGAATCATTTGCTGAGATACGCAGAGATACTAGTGCAGTTACTTTTAATGTTGTGGATGTGACAAATGAAAATGCAGCTGGGTTATCTGAATCTTCTGATAAGGAACTATCAGTTGGGTCTTCCAGTAGAAATTCAGCCCCCTTTCAACCACCGGTACCTAGACTAGAATCTTCAAGCAGCAAAGTTACAAATCATCCCAGTCCAGTCTCAGTCCTAGGATCTTCTCTTACTCATGATCTGTCATCACCTGGTTCTGAATGTTTTGGAAGTCTGAGTGATGACTTAAAAGGACTTCGAATGCAAATCCAGTTGCTGAAGTCGGAATCTGGAGACAATGTGGAAGGATCCGCGCATGTTTCAAATGATGAAGATGGTGGGGAATCATCTACTGGAATTTTAGAAGACAAGGGATTACATAACTCTGAAGATAGCTGGGAGTCTTCCTACGTGATTGATGTTTTGTCTGAAGCTGGTATTGACATAGCTCAGCCTGAAGAAGCATTTTTGGAAGTTTGGCGTTCTCTGGAATGCTCTCTGAGTCTTTCAGTGTTTGATGAACTAGAAATGAGGTACTCTGATTGGACCATTTGCTCAATGTCTGAAAGGAGATTGCTTTTTGACCGTATAAACTCTGCACTTGTCGATATACATGACCAATTCATGAGTGGCAGTGTACAGCCATGGGTAAGCCCCGGAGCCACAAGTTTATGTTTTAAATTAAATGGAACTGGGCTCCTAGACTGTCTGTACAGTATTCTGGGGGGCCAAGGAAAATCAAAGGATATCCCTCTGGACAATGCACTGCTGGATAGCCAGTTGCTGTGGTTCAAATTAACAGATGACATTGAGGACGCAATAGCTAGGGAAATTGAGAAAGTGCTGTTCGTTAGCCACTTGCAGTGGTTCAACTTAAGAGATGCCATTGAAGAAATAGTTAAGGAAACTGAGAGCTTGTTATTAGATGATCTAGTGGCAGAGATAGCCAGTACATAG 2985 0.4271 MYLKKKNEKENIKRSDIYRQSIFISFVHGSKQVRRDRKLQRFPSESDFRGGGVADIYSNSFQLGSRSRSSTERFGTPIKKLLAAEMTGETDSKRRAPGVVARLMGLDGPPLQLTKEHKGSSENHLKRTEQVGKTGSSAELYDGGSSRRSSKDQMECKDVYEVSEIAKVESGRFSSQPKRSADLKSTDAEMSFSDNKFMDAKRLATYQDLQYSQDSHDALGILDSDNGLLHEYSKRPDSLFKKHLDNQQASPLQSNSGPREAKKLSAIENFELCDFSWKSDREMIGLNYNSSREKHHDGFTCGFDRRHAMHSLPKSSKLQFKGIDEPVAAPTRIVILKPNLGKVQRATKIVSTPRSSDAFQSQWEKRAEFPDVRFRDIEMSQKKSLGSTARHSRNKSLEYRKVAKEITSQIKNNLDNGSMVFSSSRLRGYTWDDSSCDFSGIESPEKSDVTTATLGNPSDKSNTPRPSPRCSESSVSREAKKRLSERWKMSQQGRSICRSSTLAEMLAVPDKETKAAIVDSISNGKSFHDKLASNGKPAGWVEPVGISSRDGWKDGFIDSLPRSKSLPASSTPFGSPRTFLRHEALRDDRHMTPIKWERKKVVKCLDHRQCVNTRRSKSGHKKSWPSYSSNIEGDASSSPDISSIHNKVKINLEEDLPKQEVLAIESFAEIRRDTSAVTFNVVDVTNENAAGLSESSDKELSVGSSSRNSAPFQPPVPRLESSSSKVTNHPSPVSVLGSSLTHDLSSPGSECFGSLSDDLKGLRMQIQLLKSESGDNVEGSAHVSNDEDGGESSTGILEDKGLHNSEDSWESSYVIDVLSEAGIDIAQPEEAFLEVWRSLECSLSLSVFDELEMRYSDWTICSMSERRLLFDRINSALVDIHDQFMSGSVQPWVSPGATSLCFKLNGTGLLDCLYSILGGQGKSKDIPLDNALLDSQLLWFKLTDDIEDAIAREIEKVLFVSHLQWFNLRDAIEEIVKETESLLLDDLVAEIAST* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0917 994 MobiDBLite consensus disorder prediction 690 747 - -
Lja1g0917 994 MobiDBLite consensus disorder prediction 442 490 - -
Lja1g0917 994 PANTHER AFADIN 955 993 - -
Lja1g0917 994 MobiDBLite consensus disorder prediction 622 640 - -
Lja1g0917 994 MobiDBLite consensus disorder prediction 442 473 - -
Lja1g0917 994 Pfam Domain of unknown function (DUF4378) 811 990 IPR025486 -
Lja1g0917 994 MobiDBLite consensus disorder prediction 104 155 - -
Lja1g0917 994 MobiDBLite consensus disorder prediction 474 488 - -
Lja1g0917 994 MobiDBLite consensus disorder prediction 612 640 - -
Lja1g0917 994 MobiDBLite consensus disorder prediction 773 791 - -
Lja1g0917 994 MobiDBLite consensus disorder prediction 773 803 - -
Lja1g0917 994 PANTHER AFADIN 56 959 - -
Lja1g0917 994 Pfam Protein of unknown function (DUF3741) 195 238 IPR022212 -
Lja1g0917 994 MobiDBLite consensus disorder prediction 130 144 - -
Lja1g0917 994 PANTHER AFADIN 955 993 - -
Lja1g0917 994 Pfam DUF761-associated sequence motif 87 107 IPR032795 -
Lja1g0917 994 PANTHER AFADIN 56 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0917 Lja-Chr1 9015066 9022122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0917 75 958 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 32.406 1.51e-94 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0917 - - pvu:PHAVU_001G171300g 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0917 1 9015066 9022122 Lja5g2743 5 54392422 54400869 PCT