Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0915 ATGAAGAAGCTCTTCTTTAAGCCCAAAACCCCATCGTTTTCATTTGTCCACCATCATCCTCCATCTATGCTTGGAACCCCACGGAGGTCGAACCTCCCCGATCCCAGAAATGTCGAAGAAGAGAGATGTATCGCAGAAGCAGAGGCACTGATCCTGAAATGGGACTCGGAAACCTCTGCTTATGCCAAAGTGACATCTCTCTTCTTCGAGGATAAAACCGAAGCAAAACACTACACCAACAGTGTTATCCTGCTTCAGAAAGCCATGCATTCATTGCTCTCTAACAACCCTTCCTCCGAGAAGCTAATCCTCGCTCAACGCCTCATGCAGATGGCAATGAAGCGACTCAGGAAAGAGTTCTACCAGATTCTATCCATGAACCGGGCTTACCTCGACCCCGAATCGGTCTCCGTTAGATCCTCCCGGACCTCCATCCACTCTAGCACCTCCGACTACGACGAGGAAGAAGACGAAATCCGCGCTGCTGGAGACTCAATCTCTGAGGTGGAGCTGGTTTCCTCCGTCGCCATGGATGATCTTAGAACCATCGCTGACTGCATGATCTCCTGCGGCTACGCTAGAGAATGCGTCACCGTTTACAATTCCATCAGAAAATCCATCGTTGACGAAGGCATTTACCGCCTCAGCGTGGAGAAGCTCAGCCACGCGCGGTTGAACAAGATGGACTGGGAGGTTCTAGATTTGAAGATCAAGAGTTGGTTAGAAGCAATGAGGATTTCCGTTAGAACACTCTTCAACGGAGAGAGAATTCTCTGTGACCACGTCTTCAGTTCCTCAGACTCCATCAGAGAATCATGCTTCGCTGAAATTTCCAGGGACGGTGCCACTCTTATCTTCGGATTCCCGGAACTAGTTGCAAAGGCAAAGAAATCACCGCCGGAGAAATTGTTCAGCGTGCTCGACATGTACGCCGTAACAACCGCTCTGTGGCCGGAGATTGAATCAATCTTCTCCTCAGATGCTACCTCCGCCGTTAGATCTCTAGTCCTCACCTCACTTCAACGGCTGGCCGAGTGTGTTCAGATAATGCTCGCGGAGTTTGAAACCACGATCCAGAAGGAAGCTTCTAGATTACCGATGAACGGCGGTGGAGTTCACGCGCTCACGATCCAAACGATGAATTACCTCTCAACTCTCGGCGATTACGGCGGCGTGCTCCCTGACATATTCTCCCGCGCGGATTTGCCACCGTCGTCGGCGGGGCTACCGGAATCTTACTTGTACAGTCCGGAATCCGACGACTCGACGGCGCCGGCGCTCACAGCGCGCGTGGCGTGGCTGATCCTCGTTCTCCTTTGCAAACTCGATAGCAAGACGAAGCAATTGAAGGACATTTCACTTGCTTACCTGTTTCTGGCAAACAATCTCCGGCATGTCGTCACCAGAGTCCGCACCTCGAATCTGCAGTACGTGCTCGGCGACGATTGGGTCGCGAGGCACGAAGATAAGGTGAAGCGATTCGTTGCGAACTACGAGAAAATGGCGTGGCGGGAAGTGTTTGCGTCGTTGCCGGAAAATCCGACTGCGGCGGAGGCGAGGGCGGTGTTCGAGAATTTCAATCACCGTTTCGAGGAGGCGTATCGGAAACAGAACTCGTTTGTGGTGGCTGACAGGGAGTTGCGAGATGAGATAAAGGGATCGATCGCGAGAAAGATAGTGCCGAGATATCGCGAGTGGTATAATGCGGTGGTTGGCACGGTGGGATCGGTGAGGGAAATGGCGGAGATGGATTTTGTCACTTTTACCCCTTTGGATGTTGATAATTACTTGGCTAACCTTTTCTTTTTTAGAAAAAGCAACAGTGGTGTATCGTCGCCGGCGTCGTCTGTGACTTCGTCTTCTCACCAGCGGCGGATTTTGGTTCACAATTTCTAA 1896 0.5153 MKKLFFKPKTPSFSFVHHHPPSMLGTPRRSNLPDPRNVEEERCIAEAEALILKWDSETSAYAKVTSLFFEDKTEAKHYTNSVILLQKAMHSLLSNNPSSEKLILAQRLMQMAMKRLRKEFYQILSMNRAYLDPESVSVRSSRTSIHSSTSDYDEEEDEIRAAGDSISEVELVSSVAMDDLRTIADCMISCGYARECVTVYNSIRKSIVDEGIYRLSVEKLSHARLNKMDWEVLDLKIKSWLEAMRISVRTLFNGERILCDHVFSSSDSIRESCFAEISRDGATLIFGFPELVAKAKKSPPEKLFSVLDMYAVTTALWPEIESIFSSDATSAVRSLVLTSLQRLAECVQIMLAEFETTIQKEASRLPMNGGGVHALTIQTMNYLSTLGDYGGVLPDIFSRADLPPSSAGLPESYLYSPESDDSTAPALTARVAWLILVLLCKLDSKTKQLKDISLAYLFLANNLRHVVTRVRTSNLQYVLGDDWVARHEDKVKRFVANYEKMAWREVFASLPENPTAAEARAVFENFNHRFEEAYRKQNSFVVADRELRDEIKGSIARKIVPRYREWYNAVVGTVGSVREMAEMDFVTFTPLDVDNYLANLFFFRKSNSGVSSPASSVTSSSHQRRILVHNF* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0915 631 Pfam Exo70 exocyst complex subunit 238 598 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja1g0915 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 608 IPR004140 GO:0000145|GO:0006887
Lja1g0915 631 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 608 - -
Lja1g0915 631 SUPERFAMILY Cullin repeat-like 45 601 IPR016159 -
Lja1g0915 631 Gene3D Exocyst complex component Exo70 53 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0915 Lja-Chr1 8971259 8973504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0915 44 601 EXO70 exocyst subunit family AT3G09520 53.427 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0915 K07195 - gmx:100786852 843.958