Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0896 ATGTCAACAGCCGTGCAACAAGTTCGTCCAGCTCCATTAACTTCCACCTCTGATCTGCTTCCACTTTTTGACGGAACCACCAGGTTGTACATCAGTTATATTTGTCCCTTCGCACAACGTGCATGGATCACTAGGAACTATAAGGGATTACAAGATGAGATCAAATTGGTTCCTTTGGACCTTTCAAACAGGCCTGCTTGGTATAAGGAGAAAGTTTACCCTGAAAATAAGGTGCCATCATTGGAGCACAATGGGAAGGTCTTGGGGGAAAGCCTTGATTTGATCAAGTATATAGATGCCAATTTTGAAGGGCCATCTCTAGTTCCCAGTGACCCTGAAAAGAAAGAGTTTGGTGAGCAGTTGATTTCCCATCTTGATACATTCACCAAAGACGTGTACTCTGCATTCAAAGGAGATCCTATCCCGCAAGCTAGTCCTGCCTTTGATTACTTGGAGAAGGCTCTTGGTAAATTTGATGATGGCCCATTCTTTCTTGGTCAATTTAGTTGGGTGGATGTTGCCTATATTCCATTTGTTGAAAGATTCCAGCTCGTATTTTCTGAGGTGTTCAAACATGATATAGTGGTAGGAAGGCCTAAATTTGCAGCATGGATTGAGGAGGTGAACAAGATTGATGCTTATACACAGACTAGAGCTGACCCTGCAGAAAACCTTGATCTTTACAAGAAACGTTTTTTGGCTCAACAGTGA 711 0.4262 MSTAVQQVRPAPLTSTSDLLPLFDGTTRLYISYICPFAQRAWITRNYKGLQDEIKLVPLDLSNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYIDANFEGPSLVPSDPEKKEFGEQLISHLDTFTKDVYSAFKGDPIPQASPAFDYLEKALGKFDDGPFFLGQFSWVDVAYIPFVERFQLVFSEVFKHDIVVGRPKFAAWIEEVNKIDAYTQTRADPAENLDLYKKRFLAQQ* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0896 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 235 IPR044629 GO:0004364
Lja1g0896 236 PANTHER GLUTATHIONE S-TRANSFERASE TAU 3 235 - -
Lja1g0896 236 Gene3D - 104 236 - -
Lja1g0896 236 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Lja1g0896 236 Gene3D Glutaredoxin 1 103 - -
Lja1g0896 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Lja1g0896 236 SUPERFAMILY Thioredoxin-like 22 107 IPR036249 -
Lja1g0896 236 CDD GST_C_Lambda 111 229 - -
Lja1g0896 236 Pfam Glutathione S-transferase, C-terminal domain 143 206 - -
Lja1g0896 236 SFLD Glutathione Transferase (cytosolic) 28 209 IPR040079 -
Lja1g0896 236 SFLD Main (cytGST) 28 209 - -
Lja1g0896 236 SUPERFAMILY GST C-terminal domain-like 102 232 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0896 Lja-Chr1 8799138 8801858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0896 9 233 Glutathione S-transferase Gene Family AT5G02790 68.000 1.35e-117 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0896 K00799 - gmx:100793025 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0896 1 8799138 8801858 Lja5g2724 5 54095209 54097792 PCT