Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0838 ATGAGTATGATCCGTATCCGTAACTCTTTACCATTGAAGAAGAGAAGATCAGAAAAAACAATCATGTTCAATTGCATCTCTTTGCCATTGAAGAAAAGAATATCATGTCGTTGGCGGCGTGACTCTAAGGAAGAATTGATCACCACTGCAGATGAATATGAAGTGTGTGATGCTCTTCTTTCTTTGAAAACAGCAACATTCAATGTGAATCTGAATGGTGGTGATGAAAACCACCTTCTAGATCTGCCACCACTTGATAGTCTCAGGGACTATATTGATGTGTGTAGCAAATCTTTTGAGAAGAAACTGTCTAGGAGTGATTTGAATACAAATCAAAACAGGTTGTTCTTGAACAAGAAAAATGTGACAAAATGTATCTTGCCAATGCTGAGAGAAGGTGAAGATGCTAAGGTTGGAGTCCCTGTCACTGCTTATGACATGTTTGGCAACAAGTTCAACATGGTGTTCAAGATGTGGTCAAAAAAATTCTATGTGCTGAGTGGAGCTGGCTGGAACACTTTCTTCAAAACACATGCATTGAAGAAGGAAAATTTGATCACTGTGTGGGTTTTTCGTCACTTGGTGACTAATAATCTCTGCTTTGCTCTTGGGATCACAAGGAATGATGGAGATGAATTAAATGATAGCTTCAGTACTAGTGGCTGA 666 0.3889 MSMIRIRNSLPLKKRRSEKTIMFNCISLPLKKRISCRWRRDSKEELITTADEYEVCDALLSLKTATFNVNLNGGDENHLLDLPPLDSLRDYIDVCSKSFEKKLSRSDLNTNQNRLFLNKKNVTKCILPMLREGEDAKVGVPVTAYDMFGNKFNMVFKMWSKKFYVLSGAGWNTFFKTHALKKENLITVWVFRHLVTNNLCFALGITRNDGDELNDSFSTSG* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0838 221 SUPERFAMILY DNA-binding pseudobarrel domain 98 198 IPR015300 -
Lja1g0838 221 PANTHER B3 DOMAIN PLANT PROTEIN 75 206 - -
Lja1g0838 221 CDD B3_DNA 97 207 IPR003340 GO:0003677
Lja1g0838 221 Gene3D - 98 215 IPR015300 -
Lja1g0838 221 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 75 206 IPR005508 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0838 96 207 B3 DNA Binding Superfamily AT4G03170 33.628 3.77e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0838 - - gmx:121174747 136.732