Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0834 ATGGTGATGGAGATTCGAAGGAAGCTGATGCTGAAGCATTTGATCACGAAGGTAATGAAGGGTACTCTTCCATTCTTGGCACTCTTGAATAGAGCACATCAGAGAAGGGGTGCATATATTGATGATGATGATGAGAGTGAAGTTACAGCAACAACAGTGCCAGAAGATGTTAAAGAAGGACATTTTGCTGTGATAGCAATGCAGGGTGAAGAAACAGAGAGGTTTATTGTTGAGTTAGATTATTTAACAGATCCTGCTTTCTTGAAACTTCTGGAGCAGGCTAGTGAAGAGTATGGTTTTGGACAGACAGGTGCTCTTGCAGTACCTTGCAGGCCACAAGAACTTCTCAAGATCATAGAGAATCGAAGATCAGTGGATCATAGTGCCTCTTCATAA 396 0.4192 MVMEIRRKLMLKHLITKVMKGTLPFLALLNRAHQRRGAYIDDDDESEVTATTVPEDVKEGHFAVIAMQGEETERFIVELDYLTDPAFLKLLEQASEEYGFGQTGALAVPCRPQELLKIIENRRSVDHSASS* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0834 131 Pfam Auxin responsive protein 49 119 IPR003676 GO:0009733
Lja1g0834 131 PANTHER F8A24.8 PROTEIN 10 124 - -
Lja1g0834 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0834 Lja-Chr1 8163020 8163764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0834 40 129 Calmodulin-binding Proteins AT3G43120 41.935 5.52e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0834 - K14488 gmx:102661602 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0834 1 8163020 8163764 Lja1g0834 1 8163020 8163764 ECH