Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0815 ATGGTGGCAGCAGAATTCAACAGTGGCGACGGTGGCCATGGTGGTTGGAGAGGAGCAAAGACCTTCACCTACCGCGTCCTCACCGGTCGTTGGTTCATGTTATTTGCCTCTACACTAATCATGGCTGTTGCTGGGGCAACCTATGTGTTTGGCCTATACTCCAATGTTGTCAAATCCTCTTTAGGCTACGACCAAACCACTCTCAACCTTCTCAGTTTCTTCAAAGACCTTGGTACCAATGTTGGTGTCATCTCAGGGCTAATCAACGAAGTCTCGCCGCCATGGGTGGGGCTCTCAATTGGGGTTGTCATGAACTTCTTTGGCTACTTCATGATATGGCTTGCTGTCACAGGCCACATTCCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTCCATAGGTGCCAATTCCCTTACATTTGTTAACACTAGTGCTTTGGTCTCTTGTGTCAAGAATTTCCCTGGAAGCAGAGGCAGTGTTTTAGGCCTTCTCAAAGGTTATATTGGGCTAAGTAGTGCCATAATCACACAGCTTTACCATGCCTTCTATGGTGAAAATCCCCAAGCTCTTATCTTGTTCATTGCTTATCTCCCTGCAGCTGTTTCCACTGTTTTTCTTCCAGCAATTAGGACATTAAAGTTAAACACTTCACAACAAAACAAAGAGAACAAGGTTCTCTACAATTTTCTTTACATGTCACTTGGTCTTGCTGGGTTTCTCATGATATTGATCATTGTTCAGCACAAGTTAAGTTTTTCAAGGATTGAGTACATTGGTGGTGGAATTGGGGTTATTTTGCTGCTTCTTCTCCCACTTGCTGTTGTTTTCAGAGAGGAATTCAAGCTCTTGAAGGAAAAGACACAAGCTTTCTTTGACTCATCTCAATTAAAAGTAGTCACTGAAGTTCCACCTTCAAATATGGCACTACCAAAAGGTGTAGTACCATCTACCAACAACACAAGCTCACCCAAGAAAAGCTCTTGTTTGAGCACCATTTTCAAACCCCCAAATAGAGGAGAAGACCACACCATTCTGCAAGCCATGTTCAGCATTGACATGTTGATTCTCTTCATAGCAACAACATTTGGTGTTGGTGGAACATTAACTGCAATTGACAACCTAGGACAAATTGGTCACTCATTGGGATACCCTTCTAAGAGCACCACAACCTTTGTGTCCCTTGTGAGCATATGGAACTATCTTGGGAGAGCAGTTTGTGGTTATCTCTCTGAAATCTTCTTAACCAAATACAAAGTCCCTCGCCCTTACATGTTAACTCTAGTTATGCTTATATCATGTGTTGGCCATGTTCTGATAGCTCTTGGTGTGCCAAACTCTTTCTACTTGGCTTCAGTGATCATTGGGTTTTGTTTTGGAGCTCAATGGCCATTAATGTTTGCAATCATATCAGAAATTTTTGGCTTGAAATACTACTCAACATTGTACAACGTTGGAGCTTTGGCAAGCCCTGTTGGGTCTTACATACTAAACGTGAGAGTGGCTGGTTATTTGTATGATAAAGAGGCTTTGAAGCAATTGGAGGCAAAGGGATTAACTAGAGAAGCAGGGAAGGATCTAATTTGTGTAGGAGTTGAATGCTACAAAATGGCTTTTATCATCATCACTGCATTAACTCTTGTTGGTTGTTTTATTTCTTTCATTTTGGCTCTGAGGACTAGGAAATTTTACAAAGGTGATATCTACAGAAAGTTCAGGGAAGAACTTGAACCAGCTGAGACTGAGATGGGGACAACAAAAAATGATGTTGCTCTTCCTGAAACAGAAGGCAAGGGAACCTTAAGAACCACAGAGGCTTCTCCCAGCACTACCACAAGAGGCTCTTAG 1848 0.4237 MVAAEFNSGDGGHGGWRGAKTFTYRVLTGRWFMLFASTLIMAVAGATYVFGLYSNVVKSSLGYDQTTLNLLSFFKDLGTNVGVISGLINEVSPPWVGLSIGVVMNFFGYFMIWLAVTGHIPKPQVWQMCLYISIGANSLTFVNTSALVSCVKNFPGSRGSVLGLLKGYIGLSSAIITQLYHAFYGENPQALILFIAYLPAAVSTVFLPAIRTLKLNTSQQNKENKVLYNFLYMSLGLAGFLMILIIVQHKLSFSRIEYIGGGIGVILLLLLPLAVVFREEFKLLKEKTQAFFDSSQLKVVTEVPPSNMALPKGVVPSTNNTSSPKKSSCLSTIFKPPNRGEDHTILQAMFSIDMLILFIATTFGVGGTLTAIDNLGQIGHSLGYPSKSTTTFVSLVSIWNYLGRAVCGYLSEIFLTKYKVPRPYMLTLVMLISCVGHVLIALGVPNSFYLASVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNVGALASPVGSYILNVRVAGYLYDKEALKQLEAKGLTREAGKDLICVGVECYKMAFIIITALTLVGCFISFILALRTRKFYKGDIYRKFREELEPAETEMGTTKNDVALPETEGKGTLRTTEASPSTTTRGS* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0815 615 SUPERFAMILY MFS general substrate transporter 31 567 IPR036259 -
Lja1g0815 615 PANTHER MFS TRANSPORTER 12 598 - -
Lja1g0815 615 CDD MFS_Mch1p_like 29 550 - -
Lja1g0815 615 Pfam Nodulin-like 30 277 IPR010658 -
Lja1g0815 615 Gene3D MFS general substrate transporter like domains 343 564 IPR036259 -
Lja1g0815 615 MobiDBLite consensus disorder prediction 600 615 - -
Lja1g0815 615 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 598 - -
Lja1g0815 615 MobiDBLite consensus disorder prediction 579 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0815 Lja-Chr1 7928991 7930838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0815 20 575 Nodulin-like Gene Family AT2G39210 64.337 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0815 - - gmx:100797779 857.055