Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0810 ATGGTGACAGCAGAATTCAACAGTGGTGGTGGCCATGGTGGCTGGAGAGGAACAAAGACCTTCATCTACCAAGTCCTCACCGGCCGTTGGTTCATGCTATTTGCCTCTAAACTAATCATGGCTGTTGCTGGTGCAACCTACATGTTTGGCCTATACTCCAACGTTGTCAAATCCTCTTTAGGCTATGATCAATCCACTCTCAACCTTCTCAGCTTCTTCAAAGACCTTGGTGCCAATGTTGGTGTCATCTCAGGGCTAATCAACGAGGTCTCGCCGCCATGGGTGGTGCTCTCAATTGGAGTCACCATGAACTTCTTTGGCTACTTCATGATATGGCTTGCTGTCACAGGCCACATTCCCAAACCCCAAGTTTGGCACATGTGTCTCTACATTTGCCTAGGTGCAAATTCACAAACTTTTGCAAATACTGGCGCTTTGGTCACTTGTGTCAAGAACTTCCCTGGAAGTAGAGGAAGTGTTTTAGGCCTTCTCAAAGGTTATGTTGGGCTAAGTGGTGCTATAATCACTCAGCTTTACCATGCTCTCTATGGTGACAATTCAGAATCTCTCATCTTGCTCATTGCTTGGCTCCCTGCAGCTGTTTCCTCTGTTTTTCTTCCAACAATTAGGATGTTGAAGTTGAGCACTTCACAACAACAACAAAAGGAGCACAAAGTTTTCTACAATTTTCTTTACATGTCACTTGGCTTTGCAGGGTTTCTCATGGTCTTGATCATTGTTCAAAAGAATTGGAGTTTTTCAAGGATTGAGTACATTGCTGATGGAATTGGAGTTATTTTTCTGCTTCTTCTCCCACTTGCTCTGGTTTTCAGAGAGGAACTCAAGCTCTTGAAGGACAACACTCAATCTTTCTCTGACCCATCTCAATTAAAAGTAGTCACTGAAGTTCCAACTCCAAATATGGCACCACCACAGGTTGTGGTACCATCTTCTACCAACAACACAAGCTCACACAAGAAAGGCTCTTGTTGGAGAACCATTTTCAAACCCCCAAACAGGGGAGAAGACTACACCATTCTGCAAGCCCTGTTCAGCATTGACATGTTGATTCTCTTCATAGCAACAACATTTGGTGTTGGTGGAACACTAACTGCAATTGACAACCTAGGACAAATTGGGAACTCATTAGGATACCCAAGTAAAAGCATAACCACCTTTGTATCCCTAGTGAGCATATGGAACTATCTTGGAAGAGTGGTTTCTGGCTATCTCTCTGAAATCTTCTTAACAAAATACAAGTTCCCTCGTCCTTACATGCTAACTCTAGTTATGCTTCTATCTTGTGTTGGTCATGTTCTAATAGCTCTTGGTTTACCAAATTCTCTCTACTTTGCTTCAGTGATTACTGGGTTTTGCTTTGGAGCTCAGTGGCCATTAGTGTTTGCAATCATATCAGAAATTTTTGGTTTGAAATACTACTCCACTTTGTACAATTTTGGAGGTGCGGCAAGCCCTGTTGGATCTTACATACTGAATGTGAGAGTGGCAGGGTATTTGTATGATAAAGAGGCTTTGAAGCAATTGGAGGCAAAGGGTCTCACTAGAGAAGCAGGGAAGGATCTAATTTGTGTAGGAGTTGAATGTTACAGGATGGCTTTTATTATCATCTCTGCATCAACTCTGATTGGTTGTTTTGTTTCTTTTATTTTGGTTCTGAGGACTAGGAAATTTTATAAAAGTGATATCTACAGAAAGTTCCGGGAAGAAATTGAAGCAGCAGAGGCTGAGATGGGTGCTGCCAGAACTGAATTTGTTCTTCCTGAAACAGATGGCAAGGCAACCTTAAGCACCACTGAGGGTACTTCCAGAACCACAACAAGAGAGTCTTAG 1851 0.4257 MVTAEFNSGGGHGGWRGTKTFIYQVLTGRWFMLFASKLIMAVAGATYMFGLYSNVVKSSLGYDQSTLNLLSFFKDLGANVGVISGLINEVSPPWVVLSIGVTMNFFGYFMIWLAVTGHIPKPQVWHMCLYICLGANSQTFANTGALVTCVKNFPGSRGSVLGLLKGYVGLSGAIITQLYHALYGDNSESLILLIAWLPAAVSSVFLPTIRMLKLSTSQQQQKEHKVFYNFLYMSLGFAGFLMVLIIVQKNWSFSRIEYIADGIGVIFLLLLPLALVFREELKLLKDNTQSFSDPSQLKVVTEVPTPNMAPPQVVVPSSTNNTSSHKKGSCWRTIFKPPNRGEDYTILQALFSIDMLILFIATTFGVGGTLTAIDNLGQIGNSLGYPSKSITTFVSLVSIWNYLGRVVSGYLSEIFLTKYKFPRPYMLTLVMLLSCVGHVLIALGLPNSLYFASVITGFCFGAQWPLVFAIISEIFGLKYYSTLYNFGGAASPVGSYILNVRVAGYLYDKEALKQLEAKGLTREAGKDLICVGVECYRMAFIIISASTLIGCFVSFILVLRTRKFYKSDIYRKFREEIEAAEAEMGAARTEFVLPETDGKATLSTTEGTSRTTTRES* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0810 616 PANTHER MFS TRANSPORTER 11 601 - -
Lja1g0810 616 Coils Coil 570 590 - -
Lja1g0810 616 Pfam Nodulin-like 29 276 IPR010658 -
Lja1g0810 616 SUPERFAMILY MFS general substrate transporter 32 567 IPR036259 -
Lja1g0810 616 MobiDBLite consensus disorder prediction 596 616 - -
Lja1g0810 616 CDD MFS_Mch1p_like 28 551 - -
Lja1g0810 616 Gene3D MFS general substrate transporter like domains 346 566 IPR036259 -
Lja1g0810 616 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0810 Lja-Chr1 7895694 7897817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0810 19 576 Nodulin-like Gene Family AT2G39210 67.084 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0810 - - lja:Lj1g3v4626560.1 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0810 1 7895694 7897817 Lja1g0810 1 7895694 7897817 ECH