Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0773 ATGACACCAAGCTTCCATTTTATCTATGTTTTTCTTCTTTTCCTTTGTCATCATACTTCTTCACAAAAGATATGCCCAAACTGTGGCACTATGCAAGTTCCTTATCCTTTGAGCACAGAACATAACTGTGGTGACTCCTCCTATAAACTTCGCTGTGATCCTCACTCTCAAAAGCTTTACTTTGACACCCTCAATGGAAGCTCCTATGTTGTTCTCAGAATCATGTCTTCTATCCAACGCATGGTGGTGCAGCCATCACCATGGCTTCCTCATTCATGTGTCAACCAGGACATGCCTGTGAGCAATGGAATTTGGCTAAACCAATCACTCCCTTTCAACATAACTTCATCAAACACAGTGTTCCTCTTCAACTGTTCCCCTCGCCTCTTGATTTCTCCTCTCAACTGCACTTCTTCAAGCCTTTGCCACAGTTACTTGGAAAATTCAGGACATGTTGATACAAAACTAGCGCATGAGTGTGCAAGTGATCTTCACCCTTGTTGCACTTTTCTTGCTGGTGGTTTACCTTCAGCCTACAAAATCAGGCTTCATAGTTCTGGTTGCAAAGCATTCAGAAGCATCATTCATTTGGACAAAGATAAAGCTCCTAGTCAGTGGGAAGAAGGACTTGAAATTCAGTGGAAACCTCCACCAGAACCTCTCTGCAAAACACAGAGTGATTGCTCTGGAGACTCTAAGTGTTCCCCTGTTGATAAGAATCCAAACTTTCACTGTCTTTGCAATAAGGGACACCATTGGGACCCTTATATACCAAACTGTGTCTCAATAGGGGTTATTGCATTTTTCTCTCTAGCTTTAGTTCTTGTCATCATAACAAGGTCCTTCAAACTCTCTAGCTACAGGGAGAAGCAGAGAAAGGAAAGAGAGGATGTGCTGAAATTAAGCACTGGGGAGAAAAAGCCTTACAAGATGTTTCAACTGAAGGAAGTGAAGAAAGCAACAAATGGTTTTTCTAAAGAAAGGATCTTGGGGAGTGGTGGGTATGGGGAAGTTTATAGAGGTGAGTTTCAAGATGGAACATTGGTGGCTGTGAAAAAGGCTAAAGTGGGGAACTTGAAAAGCACCCAACAAGTGCTTAATGAGGTTGCAATACTTTCCCAAGTCAATCACAAGAACTTAGTAAGACTCTTGGGATGTTGTGTGGAATCTGAGACCCCATTAATGATCTATGAGTATATCTCAAATGGGACCCTCTATGATCATCTTCATGGTAGGTTTTCAAACTTTTTGGATTGGAAAACAAGGTTGAAGGTTGCTTTACAAACAGCTGAAGCATTGGCTTATTTGCATTCTGCAGCACACACTCCAATCTACCATAGAGATGTCAAGTCAACAAATATATTATTAGATGATGAATTCAATGCCAAAGTTTCAGACTTTGGTCTCTCTAGATTGGCTAATCCAGGGCTTAGTCATGTTTCAACATGTGCTCAGGGAACACTAGGATACTTGGATCCTGAATACTATAGAAACTACCAGTTAACAGATAAAAGTGATGTTTATAGTTATGGGGTCGTGTTGCTAGAGCTTTTGACTTCACAGAAAGCAATAGATTTCTCAAGAGATCAAGATGATGTTAATTTAGCAATTCATGTGAGTCAACATGCTAGCAATGGTGCAATCGTGGAAGTGGTGGATAAAAGGCTACTTTGTGTGGAACTCTCAGGGGAGAAAATGATCACAAGCATAAAACTATTCTCAGAGCTTGCACTTGAGTGTCTGAGGGAGAAGAAAGGTGAAAGGCCTAGTATGAAGGGCGTTGTTGAACGCCTCATGTGCATAATTAGGATTGTGGATCAAGAGTGA 1827 0.4116 MTPSFHFIYVFLLFLCHHTSSQKICPNCGTMQVPYPLSTEHNCGDSSYKLRCDPHSQKLYFDTLNGSSYVVLRIMSSIQRMVVQPSPWLPHSCVNQDMPVSNGIWLNQSLPFNITSSNTVFLFNCSPRLLISPLNCTSSSLCHSYLENSGHVDTKLAHECASDLHPCCTFLAGGLPSAYKIRLHSSGCKAFRSIIHLDKDKAPSQWEEGLEIQWKPPPEPLCKTQSDCSGDSKCSPVDKNPNFHCLCNKGHHWDPYIPNCVSIGVIAFFSLALVLVIITRSFKLSSYREKQRKEREDVLKLSTGEKKPYKMFQLKEVKKATNGFSKERILGSGGYGEVYRGEFQDGTLVAVKKAKVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESETPLMIYEYISNGTLYDHLHGRFSNFLDWKTRLKVALQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVSDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDQDDVNLAIHVSQHASNGAIVEVVDKRLLCVELSGEKMITSIKLFSELALECLREKKGERPSMKGVVERLMCIIRIVDQE* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0773 608 Gene3D Phosphorylase Kinase; domain 1 294 399 - -
Lja1g0773 608 Pfam Protein kinase domain 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0773 608 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 608 IPR045274 GO:0007166
Lja1g0773 608 CDD STKc_IRAK 330 599 - -
Lja1g0773 608 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 18 608 - -
Lja1g0773 608 ProSiteProfiles Protein kinase domain profile. 324 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0773 608 SMART serkin_6 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0773 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Lja1g0773 608 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Lja1g0773 608 Gene3D Transferase(Phosphotransferase) domain 1 400 607 - -
Lja1g0773 608 SUPERFAMILY Protein kinase-like (PK-like) 307 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0773 Lja-Chr1 7502698 7504595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0773 25 608 Receptor kinase-like Gene Family AT5G02070 46.582 4.15e-179 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lja1g0773 Pkinase 7.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0773 - - gmx:100804678 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0773 1 7502698 7504595 Lja1g0773 1 7502698 7504595 ECH