Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0756 ATGCTCTTCATCACTATCCCAGCATATCAATATAGAAAGATAAAACAGGCACAAAAACCTTCTTCTTCCCCACACCATAACATGAACAAGGTTGCATTGGCATTGGCATTGTCCTTTACCATTCTCTGCTTATCACAGAGTGCACCCCAGAATGACACACATTCCCTCACCCAATTCCGCCTCCAAACCGACACACACGGCTACCTCCTCGGAAACTGGACCGGCAGCGACGCCTGCACCGCCGCGCCATGGCGCGGCGTGGAGTGCTCCCCAAACGGCAGAGTGGTGGGCCTCTCCCTCCCTTCCCTCAATCTCAGAGGCCCCGTTGAATCTCTCTCGCCCCTCGCCTACCTTCGCTTCCTCGACCTCCATCACAACCGCTTGAACGGCACCATCGCCGCTCTCTGCAACTGCACCAGCCTGGAGCTCCTCTACCTCTCCGGCAATGACTTCTCCGGCGAGATTCCATCGGAGATAGCCTACCTCAGGCTCCTCCTCAAGCTTGACATCTCCGACAACAACATCGGAGGCCATGTTCCGAAGAAACTCTCCAAACTAACTCACCTCCTCACGCTCCGGTTACAGAACAACGCGCTCTCTGGCCCTGTCCCTGATCTTTCTTCCTCCCTCTTCAATCTCAGCGAGCTCAACATGACCAACAACGAACTCAACGGACGCTTACCCGACGCCATGTTCGATAAATTCGGCAACGCAAGCTTCTCCGGCAACGACGGCCTTTGTGGGCCAACCCCATTGCCGGAATGTTCCGAAACAGAGTCCCCTGCTTCAACAGAGTCCTCTGTTCCTTCAAACCCGAGCTCACTGCCACAAACAAGCGGTGTAATTGCAGCTCCTCCGAAACAGAAGAGATGGTTGAGCCCCGGCGGCATTGTGGCGGTTGTGGTGGCGGCTTCTGTGGGGTTTGTGGTGGTGGTATCTTTTGTGGTAGCTCAGTGCTGTGGCAGGGGAGGGAGAACCTCGAACTCGTTAATGGGGAGTGAGATTGGTGGGAAGAGGAAGAGTGAGAGTAGCTACGGGAGTGAGAAGAAGGGCTATGGCGGTGGTGGTGTTGATAGAGATAGCGATGGAACGAACACAGAGACAGAGCGTAGTAGCAAGCTTGTGTTTCTCGATAGGCAGACTGACGTGCAGTTTGAGCTGGAGGATCTGCTTAAAGCTTCGGCGGAGATGCTCGGGAAAGGGAGCTTGGGGACGGTGTACAGGGCGATGCTTGATGATGGAAACACTGTGGCTGTGAAGAGGCTCAAGGATGCAAACCCTTGTGAGAGGGGTGAGTTTGAGCAGTATATGGATCTTGTAGGGAAGCTCAAGCATCCTAATATTGTGAGACTCAGAGCATATTACTATGCTAAGGAGGAGAAGCTTCTTGTCTATGATTATCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCAGGAAGGATTCCACTAGATTGGACAACAAGAATAAGCTTGGTGTTGGGTGCAGCAAGAGGCCTAGCTCGAATTCACACGGAGCACAGCGCAACCAAGATCCCTCACGGCAACATCAAATCCTCCAACGTGCTTCTTGACAAGAACGGAATCGCTTCCATAGCAGACTTTGGCCTATCACTTCTCCTAAACCCTGTTCACGCCATCACAAGGTTAGGTGGATACAGAGCACCAGAGCAAGCAGAGTTGAAGAAGCTCTCTCAGGAAGCTGATGTTTACGCCTTTGGGGTGTTACTGCTGGAAATTCTCACCGGAAAATCACCCTCTGAAGAGCTGGATCTTCCAAAACGGGTTGGTTCTGTTGTGGTGAAGGAAGAGTGGAAGAATTCAGAGGTGTTTGATGAGGAGCTCTTGAGGTACAAGAACATTGAGGAGGAGCTTGTGAACATGCTCAATGTGGGGCTTGCTTGTGTGGCGGCGCAGCCGGAGAAGAGGCCAAGTATGTTGGAGGTTGTGAAGATGATTGAGGATGTGAAGGTGGAAGTGGAACAATCTCCTTTGAGATCAGAGGATTATGATCAATCTCGCTATTCACTTTCACCTTCACTTGCCACCACTGAAGATGGCTAG 2076 0.5212 MLFITIPAYQYRKIKQAQKPSSSPHHNMNKVALALALSFTILCLSQSAPQNDTHSLTQFRLQTDTHGYLLGNWTGSDACTAAPWRGVECSPNGRVVGLSLPSLNLRGPVESLSPLAYLRFLDLHHNRLNGTIAALCNCTSLELLYLSGNDFSGEIPSEIAYLRLLLKLDISDNNIGGHVPKKLSKLTHLLTLRLQNNALSGPVPDLSSSLFNLSELNMTNNELNGRLPDAMFDKFGNASFSGNDGLCGPTPLPECSETESPASTESSVPSNPSSLPQTSGVIAAPPKQKRWLSPGGIVAVVVAASVGFVVVVSFVVAQCCGRGGRTSNSLMGSEIGGKRKSESSYGSEKKGYGGGGVDRDSDGTNTETERSSKLVFLDRQTDVQFELEDLLKASAEMLGKGSLGTVYRAMLDDGNTVAVKRLKDANPCERGEFEQYMDLVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHTEHSATKIPHGNIKSSNVLLDKNGIASIADFGLSLLLNPVHAITRLGGYRAPEQAELKKLSQEADVYAFGVLLLEILTGKSPSEELDLPKRVGSVVVKEEWKNSEVFDEELLRYKNIEEELVNMLNVGLACVAAQPEKRPSMLEVVKMIEDVKVEVEQSPLRSEDYDQSRYSLSPSLATTEDG* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0756 691 SUPERFAMILY L domain-like 53 232 - -
Lja1g0756 691 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 30 682 - -
Lja1g0756 691 PANTHER LRR RECEPTOR-LIKE KINASE 30 682 - -
Lja1g0756 691 Gene3D Transferase(Phosphotransferase) domain 1 468 681 - -
Lja1g0756 691 MobiDBLite consensus disorder prediction 249 281 - -
Lja1g0756 691 CDD STKc_IRAK 398 658 - -
Lja1g0756 691 Gene3D Ribonuclease Inhibitor 113 263 IPR032675 -
Lja1g0756 691 Gene3D Ribonuclease Inhibitor 45 112 IPR032675 -
Lja1g0756 691 MobiDBLite consensus disorder prediction 673 691 - -
Lja1g0756 691 MobiDBLite consensus disorder prediction 667 691 - -
Lja1g0756 691 MobiDBLite consensus disorder prediction 328 373 - -
Lja1g0756 691 MobiDBLite consensus disorder prediction 256 281 - -
Lja1g0756 691 SUPERFAMILY Protein kinase-like (PK-like) 396 657 IPR011009 -
Lja1g0756 691 Pfam Protein kinase domain 396 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0756 691 ProSiteProfiles Protein kinase domain profile. 392 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0756 691 Pfam Leucine rich repeat N-terminal domain 50 90 IPR013210 -
Lja1g0756 691 Gene3D Phosphorylase Kinase; domain 1 359 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0756 Lja-Chr1 7356160 7359317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0756 50 689 Receptor kinase-like Gene Family AT2G36570 61.699 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja1g0756 Pkinase 6.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0756 - - gmx:100808402 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0756 1 7356160 7359317 Lja1g0756 1 7356160 7359317 ECH
Lja1g0756 1 7356160 7359317 Lja5g2548 5 50096827 50099506 PCT