Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0742 ATGGAAATGCCCGCACGAAGATCCAACTACTCACTCGTCAGTCAAATTCCCGACGACCACTTCGCCGGTACGCCACCACTCATCGATTCTTCCTCCGGCGACGGCAAAACCAAGTTCGACAGGGCCGCCTTTGACTGGGACTCCCTCTCCGATCACAGGCGGATCGGGAACATCTTCCCCTCGCTCGGCCTTCAGCGCCACTCCAGCGGGAGTAGTTTCGGCGAGAGCTCTCTCTCCGGCGAGTTTTACGCTCCGACGCTTTCAACCGCTGCTGCCAGCGAGATCGACGCGTTTGCCTACGCGCACGATGGTGCTGTTGGTGGGAGTGAGGTCAGAGCCAAGTTTCTGGCGAGGATCGGTGGGTCCTATGGTAGGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTGCAGCTGGCTTTAGCGCTTCGGCTTTCGTCGGAGGCTACGCGTGCCGGTGATCCCAATTTTCTTGATCCTGGTCCGGATGAATCCGCTTTGAGGTCATCGCCGTTGTGCACGGCTGAGGCAGTGTCGCATAGGTTCTGGGTCAACGGCTGCCTATTATACTTCGACAAAATTCCTGATGGCTTTTATGTAATTCATGGGATGGATCCCTATGTATGGACCGTGTGCGCTGATGTGCAGGAAAGTGGCCGAATTCCATCAATTGAGACACTAAAATCAATAAATCCCTCTTATGGTTCTTCAGTTGAAGTAGTTTTGGTGGACAGACATAGTGATTCAAGCTTAAAAGACCTCCAAAATAGGGTACATAACATTTCTTTTACCTGCAGAACCGCCGAAGAAGTTGTAGAACATCTTGCCAAGCTGGTTTGCAATTACATGGGGGGTTCAGCTTCTGTTGGGGAAGATGGCATTTTTCCCATATGGAGAGAGTGCATTAATGATCTCAAAGATTGCTTAGGATCTGTTGCAGTCCCAATCGGCAGTCTATCTATTGGACTATGCAGTCATCGTGCTATACTATTCAAAGTACTAGCTGATACCATTGATCTACCATGTCGAATTGCGAAGGGTTGTAAATATTGCTCAAGAGACGATGCCTCCTCATGTCTTGTTCGATTTGGGCTTGACAAGGAATATATGGTTGATCTAGTTGGGAAGCCGGGTTGCTTATGTGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGAATTAAGCCCGTTGGACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCAGATTGTCTGTCTCTTGAGCTTGTCTTTGATACTGCTTCTGCAGAACAATATGATGGGAAGTGCAGGGACAGGACCCCTGGGCCAATTCCAAATAATAGTGGCAGAAGTTCACTGCATCCACAAGATAATCATTCAAGCCCACATGATCAAGGCGCTGAAACATTTAAATCAGGGGGCCTTCCTCAGAACATCGTTGAACAGACAACTGTGGGCAAGGATCTCTTGCCTCTAAAGCATAACCGTCCTGTTCATAGAGATATTAAAATCCCATTAGCGCAAACAAATATCCATGTGGATATTATTGGGGGTGGAAGGTATATTGAAGGAAGTCAACTGATTCCTAGCATACCTATTAGAGAGTTTACCTTTGATATGGAAGATCTGGACATACCTTGGAGTGATCTTGTGTTAAAAGAAAGAATAGGATCAGGTTCTTTTGGAACTGTACATCATGCTGACTGGAATGGCTCGGAGGTTGCTGTGAAAATTCTGATGGAGCAAGACCTTTTTGCTGAACGCTTCAATGAATTCTTGAGGGAGGTTGCAATAATGAAATGCTTGCGGCATCCAAACATTGTTTTATTCATGGGTGCAGTCACTAAGCCTCCTAATTTATCAATTGTCACAGAATATTTGTCAAGGGGTAGCTTATATAGGCTGTTGCATAAACCTGGCGCAAAAGAGATGTTGGATGAGAGGCGTAGGCTTAACATGGCTTTTGATGTGGCTAAAGGGATGAATTATCTTCATAAACATAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATTTACTGTCAAGGTTTGTGATTTTGGGCTTTCTCGACTAAAAGCAAATACATTTCTCTCATCCAAGTCAGCTGCTGGAACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGCGATGAGCCATCCAATGAGAAGTCAGATGTCTACAGCTTTGGCGTTATCTTGTGGGAGATTGCGACATTGAAACAGCCATGGGGTAATTTGAATCCAGCTCAGGTTGTGGCGGCTGTTGGCTTTAAGGGAAAAAGACTCGATATACCTCATGATTTGAATCCCCAATTAGCCTCAATAATTGAGGTCTGCTGGGCCGACGAGCCTTGGAAACGCCCTTCTTTTTCAAGTATTATGGATACTTTGAAAGAATTGCTCAAACCCCCAATACCTCAACATAGTCATCCAAGCACGCTATTACTTAACTGA 2496 0.4619 MEMPARRSNYSLVSQIPDDHFAGTPPLIDSSSGDGKTKFDRAAFDWDSLSDHRRIGNIFPSLGLQRHSSGSSFGESSLSGEFYAPTLSTAAASEIDAFAYAHDGAVGGSEVRAKFLARIGGSYGRSWAQQTEESYQLQLALALRLSSEATRAGDPNFLDPGPDESALRSSPLCTAEAVSHRFWVNGCLLYFDKIPDGFYVIHGMDPYVWTVCADVQESGRIPSIETLKSINPSYGSSVEVVLVDRHSDSSLKDLQNRVHNISFTCRTAEEVVEHLAKLVCNYMGGSASVGEDGIFPIWRECINDLKDCLGSVAVPIGSLSIGLCSHRAILFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDKEYMVDLVGKPGCLCEPDSLLNGPSSISFSSPLRFPRIKPVGPTIDFRSLAKQYFSDCLSLELVFDTASAEQYDGKCRDRTPGPIPNNSGRSSLHPQDNHSSPHDQGAETFKSGGLPQNIVEQTTVGKDLLPLKHNRPVHRDIKIPLAQTNIHVDIIGGGRYIEGSQLIPSIPIREFTFDMEDLDIPWSDLVLKERIGSGSFGTVHHADWNGSEVAVKILMEQDLFAERFNEFLREVAIMKCLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGAKEMLDERRRLNMAFDVAKGMNYLHKHNPPIVHRDLKSPNLLVDKKFTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEIATLKQPWGNLNPAQVVAAVGFKGKRLDIPHDLNPQLASIIEVCWADEPWKRPSFSSIMDTLKELLKPPIPQHSHPSTLLLN* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0742 831 MobiDBLite consensus disorder prediction 451 483 - -
Lja1g0742 831 SUPERFAMILY Protein kinase-like (PK-like) 534 811 IPR011009 -
Lja1g0742 831 MobiDBLite consensus disorder prediction 441 483 - -
Lja1g0742 831 ProSiteProfiles Protein kinase domain profile. 557 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0742 831 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 115 822 - -
Lja1g0742 831 Pfam Protein tyrosine and serine/threonine kinase 558 811 IPR001245 GO:0004672|GO:0006468
Lja1g0742 831 ProSitePatterns Protein kinases ATP-binding region signature. 563 584 IPR017441 GO:0005524
Lja1g0742 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Lja1g0742 831 Gene3D Phosphorylase Kinase; domain 1 550 635 - -
Lja1g0742 831 SMART serkin_6 557 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0742 831 PRINTS Tyrosine kinase catalytic domain signature 738 760 IPR001245 GO:0004672|GO:0006468
Lja1g0742 831 PRINTS Tyrosine kinase catalytic domain signature 719 729 IPR001245 GO:0004672|GO:0006468
Lja1g0742 831 PRINTS Tyrosine kinase catalytic domain signature 631 644 IPR001245 GO:0004672|GO:0006468
Lja1g0742 831 PRINTS Tyrosine kinase catalytic domain signature 672 690 IPR001245 GO:0004672|GO:0006468
Lja1g0742 831 PRINTS Tyrosine kinase catalytic domain signature 782 804 IPR001245 GO:0004672|GO:0006468
Lja1g0742 831 Pfam Ethylene-responsive protein kinase Le-CTR1 175 381 - -
Lja1g0742 831 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 115 822 - -
Lja1g0742 831 CDD STKc_MAP3K-like 563 811 - -
Lja1g0742 831 Gene3D Transferase(Phosphotransferase) domain 1 636 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0742 Lja-Chr1 7181321 7200033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0742 1 820 MAP Kinase Kinase Kinase AT5G03730 63.084 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lja1g0742 PK_Tyr_Ser-Thr 3.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0742 K14510 - gmx:100775768 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0742 1 7181321 7200033 Lja1g0742 1 7181321 7200033 ECH
Lja1g0742 1 7181321 7200033 Lja5g2533 5 49802657 49813588 PCT