Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0734 ATGATGGCTCAAAAGCAGCACTTCTTACACGAGCTTCTGAAGGAGGATCAAGAACCGTTCCTCCTCAACAATTACATCTCTGATAGGTGCAGCCAGATGAAAAGGCCTTCACCCAAGACAAGTTTACAAGCCAAGAAACGCAAACCAATCTTCAATCAAAGCTCAAACTTCCCTGTAAATCTCTGCAGAAAAACTTGCCTGTTCTCCTTCACAGAAACCGCCACAACCCCTGACCTCCTCAGAAAATCTCCACTCTTCGAACCTAGAAGCCCCTGCAAGTCTCCCAACGCCATTTTCCTCCACATCCCTTCTCGAACTTCAGCTCTGCTTCTTGAAGCTGCTCTCAGGATCCAGAAACAGTCCTCATCTACTTCCAAATCCAAAACCAGAGGCTTCGGGCTTTTCGGGTCTTTATTCAAGAGACTAACACAGCGAAACAACAACTACAGTACTTCCAAATCCTCTGTGAAATGGGGTTCGCGTAGAAAACTCTGTAATGGAACAGAGGAGAAGATGGAGGAGTCTCAGAAGGAAAGCAACAATGCTTCTGAGGTGGGGTTTCTCTGTTCTTACAATGGCAGGACTAGTAGTGCTGTTTGGTCTGAGAGCAACGAAGATAAATCACCTTCAAGCAGTGGCCACTCTGATGATGATGACTCTGAAGTGATTCACTTTGTGACTGATAATCAGCAAACATGTGATTTTTGCAGCCACCACAGTGCTTTCTGTGAAAGTCCTTTCCGTTTTGCTCTTCAAACGAGTTCTTCTCCTTCCTCCGGCCACCACACGCCGGAGCTACTGTCTCCAAGTCGCCACATAATAGAGGACAAAGAAAGTAAAGGAGGTGAGACCCTCAATGAAATGAAGTCAGGGGAAGAGGTTGAAGAAGAAGATAAGGAACAATGTAGTCCAGTGTCTGTTTTAGACCCTCCCTTCGAGGATGATGATGATGAAGGGCATGGAAACAACAATGAGAATGATGATGATGATGATGATGATGGTGATTTTGATCTGGAGAGCAGCTATGCAATTGTTCAGAGAGCTAAACAGCAACTGTTGTACAAGCTTTGCAGATTTGAGAAACTAGCAGGGTTAGATCCTGTAGAACTTGAGAAAAGGATGCTGGAGCAAGAAGAGGACGAGGACGAGACTTTGATGGAAGAGGGTGATCATGAAGATGAGGATAGAGAAGCATCTTATAAAGAGAATGACTTAAGAGTTATAGTTTTACAAGCTGTGTACCAGTCAAGGGTTAATGACAGACAGCAAATCCCACAAGAGTTTAGGAAACTAGTTTTTGATCTCATTGTGGAAGAAGAGAGAGGACTTAATTCCCTAGAAGATAAGGAAGTGGTGGCAAGAAAGATATGCAAGAGGCTTGAGTTGTGGAAAGAAGTGGAGTCTAACACAATTGACATGATGATAGAAGAGGATTTCAACAGAGAGGATTGTGTGTGGAAGAAAAATGGTGAGCAGATAAAGATGATGGCAGGGGAGGTTGAGCTTGCTATCTTTGGCTTTCTGGTGGAGGAATTTTCAGAGGAATTAGTATGTTAA 1557 0.4387 MMAQKQHFLHELLKEDQEPFLLNNYISDRCSQMKRPSPKTSLQAKKRKPIFNQSSNFPVNLCRKTCLFSFTETATTPDLLRKSPLFEPRSPCKSPNAIFLHIPSRTSALLLEAALRIQKQSSSTSKSKTRGFGLFGSLFKRLTQRNNNYSTSKSSVKWGSRRKLCNGTEEKMEESQKESNNASEVGFLCSYNGRTSSAVWSESNEDKSPSSSGHSDDDDSEVIHFVTDNQQTCDFCSHHSAFCESPFRFALQTSSSPSSGHHTPELLSPSRHIIEDKESKGGETLNEMKSGEEVEEEDKEQCSPVSVLDPPFEDDDDEGHGNNNENDDDDDDDGDFDLESSYAIVQRAKQQLLYKLCRFEKLAGLDPVELEKRMLEQEEDEDETLMEEGDHEDEDREASYKENDLRVIVLQAVYQSRVNDRQQIPQEFRKLVFDLIVEEERGLNSLEDKEVVARKICKRLELWKEVESNTIDMMIEEDFNREDCVWKKNGEQIKMMAGEVELAIFGFLVEEFSEELVC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0734 518 MobiDBLite consensus disorder prediction 376 398 - -
Lja1g0734 518 MobiDBLite consensus disorder prediction 376 393 - -
Lja1g0734 518 MobiDBLite consensus disorder prediction 200 220 - -
Lja1g0734 518 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 518 - -
Lja1g0734 518 MobiDBLite consensus disorder prediction 310 337 - -
Lja1g0734 518 MobiDBLite consensus disorder prediction 268 289 - -
Lja1g0734 518 MobiDBLite consensus disorder prediction 252 337 - -
Lja1g0734 518 Coils Coil 165 185 - -
Lja1g0734 518 Coils Coil 368 388 - -
Lja1g0734 518 PANTHER OS04G0572500 PROTEIN 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0734 Lja-Chr1 7085755 7089685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0734 2 313 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 40.634 6.58e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0734 - - lja:Lj1g3v4699690.1 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0734 1 7085755 7089685 Lja1g0734 1 7085755 7089685 ECH
Lja1g0734 1 7085755 7089685 Lja5g2520 5 49533718 49537447 PCT