Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0721 ATGTTACACAAGAATTTGCTACTATTACTACTACCACTACTCATCTTCCCCATACTCATCCAGGGACAACATGAAAGAAAGCCGTATATTGTGTACATGGGAGAACTACCAGCGGCAAGAACCCTGCATGCGATGCAAGAAAACCACCACAACTTGCTCACCACTGCAATTGGAAACAAGCAGTTAGCCAGACAGTTCAAAATGCATAGCTATGGAAAGAGCTTCAATGGATTCGTTGCAAGACTTTTGCCAAATGAAGCAGAGAAACTGCTAGAGGATGACAATGTGGTATCTGTGTTTCCTAATACACGCCGCAAATTACACACAACAAGGTCATGGGATTTTCTAGGAATGCCCTTAAATGTGAGGAGAAACCCTGCCATGGAAAGCAATATGGTTGTGGGTGTGTTAGACACAGGTATTTGGGTTGACTGCCCCAGTTTCAATGATACAGGGTATGGGCCTCCCCCACGTAGATGGAAGGGTACATGTATGACAGGAGGCAACTTCACTGGCTGCAACAACAAGGTGATCGGAGCAAAATACTTCAACCTCGACAAGAGCAGTCCACCGATAGAGAACCCAAGTCCGGTGGACTACCAGGGCCACGGCACTCACACGGCCTCCACAGCGGCAGGCGGAACAGCAGCGGGTGCAAGCCTGTACGGTGTCGGCGAAGGCACAGCACGTGGTGGCGTACCATCTGCGCGTGTTGCAATGTACAAGGTATGCTGGAGCATAGGGTGCAGTGACATGGACATGCTTGCTGGGTTCGACGAGGCCATAGCGGATGGCGTGAACGTGATATCAGTGTCGATTGGAGGTCCTTCACGTGACTTCTTCACTGACCCGATTGCGATTGGAGCATTCCACGCTATGAGGAAAGGGATTCTCACTTCTTGCTCTGCTGGGAATGATGGCCCTCGCCCTACCACCGTTGAGAATGTTGCTCCCTGGATTTTGACTGTTGCCGCTTCCTCCATTGATAGACAATTCACTACACTGGTAGCTTTTGGAGATGGAAAGAAAGTCATGGGACAATCCATTAATACATTCGCCCCTCGGAAAAGGATGTATCCTTTGACTAGTGGAGTTCTAGCTGCCAACCGTAGTGGGGATGGCTATGGCAGTCCGAGTGGTTGTGATTATGGGACTCTAGACAAGAACTTGGTGGAGGGAAGAATAGTGTACTGCCTTGGGGGAACGGGCAGCCAGGACCTGACCATTAAACAACTAGGGGGAGCAGGGATCATCATTGGCCTTCAAGACAAAGTAGAAGGCTCTTACACCACAGTAATTCCTGGATCATATGTTGATGCAAATACTGAGGGCAAAACCATAGATCTCTACATTAATTCCACACAGAATGCACAAGCAGTTATATTCAAGACAGGAAGCACACAAATCCCAGCTCCATATCTTGTTTCTTTTTCAGCAAGAGGTCCTCAACTCATCACCAAAAACATTCTCAAGCCTGACTTGGCTGCTCCAGGACTGGACATACTAGCTGCGTATTCCAAACTGACAACAACAACAGGGTACCCTGATGACCCTCGTCACTACGTTTATAACATACTCTCAGGAACCTCTATGGCATGTCCACATGCCACTGCAGCTGCTGCCTATGTCAAATCCTTCCACCCTGATTGGAGTCCTGCTGCAATTAAATCTGCCCTCATGACCACTGCAACTCCTTTGAAAATCAATGACAATTTCACGGAGCTGGGATCTGGGTCAGGACAGATTAGCCCAGTTAGTGCTTTGCATCCAGGCCTGCTCTATGACATTGGAATGAACTCCTACCTTTCCTTCTTGTGCAAGCAAGGCTACAACAGCACTAGCATAGGTATATTAATTGGCACAAGAGGTTTCAACTGCACAACCATTAAGCCTGCACCTGGCACAGATGGACTCAACTACCCCAGCATGCATGTCCAGCTCCTGGGTGCCAGTTCCAGAATTTCTGCAGTTTTTTTCAGGACTGTGACTAATGTAGGATCTGCAAATTCAACGTACAAGGCTAAAGTCACAGCACCCAAGGGTCTTACAGTGAAGGTCGTCCCGGATACATTGGAATTTAGACAGTTGCACCAAGACCTGTCATTCAAGGTTGTCCTGAACGGGCCTCCAATGCCAGATGGGACACTGTTATTATCTGCATCACTTGAATGGAGTGACTCTAAACACAGTGTTAGGAGTCCGATAGTAGTTTTTAAGCCACAATATTGA 2229 0.4787 MLHKNLLLLLLPLLIFPILIQGQHERKPYIVYMGELPAARTLHAMQENHHNLLTTAIGNKQLARQFKMHSYGKSFNGFVARLLPNEAEKLLEDDNVVSVFPNTRRKLHTTRSWDFLGMPLNVRRNPAMESNMVVGVLDTGIWVDCPSFNDTGYGPPPRRWKGTCMTGGNFTGCNNKVIGAKYFNLDKSSPPIENPSPVDYQGHGTHTASTAAGGTAAGASLYGVGEGTARGGVPSARVAMYKVCWSIGCSDMDMLAGFDEAIADGVNVISVSIGGPSRDFFTDPIAIGAFHAMRKGILTSCSAGNDGPRPTTVENVAPWILTVAASSIDRQFTTLVAFGDGKKVMGQSINTFAPRKRMYPLTSGVLAANRSGDGYGSPSGCDYGTLDKNLVEGRIVYCLGGTGSQDLTIKQLGGAGIIIGLQDKVEGSYTTVIPGSYVDANTEGKTIDLYINSTQNAQAVIFKTGSTQIPAPYLVSFSARGPQLITKNILKPDLAAPGLDILAAYSKLTTTTGYPDDPRHYVYNILSGTSMACPHATAAAAYVKSFHPDWSPAAIKSALMTTATPLKINDNFTELGSGSGQISPVSALHPGLLYDIGMNSYLSFLCKQGYNSTSIGILIGTRGFNCTTIKPAPGTDGLNYPSMHVQLLGASSRISAVFFRTVTNVGSANSTYKAKVTAPKGLTVKVVPDTLEFRQLHQDLSFKVVLNGPPMPDGTLLLSASLEWSDSKHSVRSPIVVFKPQY* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0721 742 Gene3D - 329 467 - -
Lja1g0721 742 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Lja1g0721 742 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Lja1g0721 742 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Lja1g0721 742 Pfam Fibronectin type-III domain 638 737 IPR041469 -
Lja1g0721 742 CDD PA_subtilisin_like 339 461 - -
Lja1g0721 742 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 134 144 IPR023827 -
Lja1g0721 742 Pfam Subtilase family 130 573 IPR000209 GO:0006508|GO:0008236
Lja1g0721 742 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
Lja1g0721 742 SUPERFAMILY Subtilisin-like 126 585 IPR036852 GO:0004252|GO:0006508
Lja1g0721 742 CDD Peptidases_S8_3 106 564 IPR034197 -
Lja1g0721 742 ProSiteProfiles Serine proteases, subtilase domain profile. 112 588 - -
Lja1g0721 742 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Lja1g0721 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 108 IPR037045 -
Lja1g0721 742 Gene3D Peptidase S8/S53 domain 131 601 IPR036852 GO:0004252|GO:0006508
Lja1g0721 742 PANTHER CUCUMISIN PROTEIN 19 739 - -
Lja1g0721 742 Gene3D - 605 739 - -
Lja1g0721 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 739 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0721 Lja-Chr1 6935889 6942719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0721 25 562 Subtilisin-like Serine Gene Family AT5G03620 61.792 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0721 - - gmx:100793716 1106.66