Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0719 ATGATGGACTCGCACAAGCTAGTGCATCTCTCCCCCCTCCTCTGTCTTCTCCTAGTTCTACATCTCTCAGGACAAGCAGAGTCTCTTCTTAAACATGATGATGCTCCAACAAAATTGTTCGTTTTTGGAGACTCCTATGCTGACACAGGCAACATCAGGAAAGGGTTGGCTAATTCATGGAAAGACCCTTACGGCGTCACCTTCCCCGGCAAGCCTGCCGGTCGATTCTCCGACGGCAGAGTCCTCACCGATTACATTGCAAAGTATTTGAAGGTGAAATCACCAGTCCCTTACAGATTGAGGAAACTGATGCCGCAACATCTGAAATATGGAATGAACTTTGCATTCGGTGGAAGTGGTGTCTTTGATACGTCAGTTCCAGCTCCAAACATGACAACCCAGATTGATTTGTTGCAACAAGTCATCAGTTACAAAGTCTACACCGCCTCAGATCTCGCCAACTCGGTGGCATTCCTTTCTGTCGCTGGAAATGACTATAGTCAATACTTGGCCATCAATGGCTCTGTTCAGGGTTTACCATCATTCGTGGCCCAAGTGATTAACCAGACAACAACCAACATGATCCGCATCCAACGGCTGGGAGTGAAGAAAGTAGTCGTGGGCAGCCTCCAACCCGTTGGATGCCTCCCTCAGATGACAGCCCAATCCTCCTTCCAACACTGCAACGACACCTCCAACAACCTTGTACTCCTCCACAACACCCTCTTGAACCAAGCCGTGACCGTACTGAACCACAACAACACTTCGAGCTTCGTGGTTCTTAACATATACGAGAGCTTCTTGTCGGTGCTGAACCACCCAACCACACACAACATTCAGAGCCAGTTGAAACCCTGCTGTGTTGGTGTGAGTAGTGAGTACTCGTGTGGGAGCGTGGATCAGAACAATGTGAAGAAGTATCAGGTTTGTGATGAGCCCAAGTCATCGTTTTTTTGGGATATGGTGCACCCTACGGAGGCTGGGTGGCGAGCAGTTTATAACAAGTTGAGAACCATGAATGCTCTTCAACAGATCCATGTTTACTAG 1047 0.4833 MMDSHKLVHLSPLLCLLLVLHLSGQAESLLKHDDAPTKLFVFGDSYADTGNIRKGLANSWKDPYGVTFPGKPAGRFSDGRVLTDYIAKYLKVKSPVPYRLRKLMPQHLKYGMNFAFGGSGVFDTSVPAPNMTTQIDLLQQVISYKVYTASDLANSVAFLSVAGNDYSQYLAINGSVQGLPSFVAQVINQTTTNMIRIQRLGVKKVVVGSLQPVGCLPQMTAQSSFQHCNDTSNNLVLLHNTLLNQAVTVLNHNNTSSFVVLNIYESFLSVLNHPTTHNIQSQLKPCCVGVSSEYSCGSVDQNNVKKYQVCDEPKSSFFWDMVHPTEAGWRAVYNKLRTMNALQQIHVY* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0719 348 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 346 - -
Lja1g0719 348 SUPERFAMILY SGNH hydrolase 36 336 - -
Lja1g0719 348 Pfam GDSL-like Lipase/Acylhydrolase 39 335 IPR001087 GO:0016788
Lja1g0719 348 Gene3D SGNH hydrolase 27 346 IPR036514 -
Lja1g0719 348 CDD SGNH_plant_lipase_like 39 336 IPR035669 -
Lja1g0719 348 PANTHER OSJNBB0059K02.9 PROTEIN 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0719 Lja-Chr1 6888025 6893234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0719 13 332 Pollen Coat Proteome AT1G75930 27.299 3.09e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0719 - - gmx:100788092 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0964 5 9405613 9407779 Lja1g0719 1 6888025 6893234 ECH
Lja1g0719 1 6888025 6893234 Lja1g0719 1 6888025 6893234 ECH
Lja1g0719 1 6888025 6893234 Lja5g2505 5 49254211 49256424 PCT