Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0707 ATGAGTTTGGATAGCGTGAGAATGGCAACGTGTTTTGCACCTTCCAATGCTAGAAATTCAGCTGGGGTTTTGGCTGTTGTTGGAGGGAGAACACTGCTTGAGAGTCACAATAGTAGACCCTGCTTCTTGAAAATGCAGGAGAACAAGTGGGGGGTTTTTGGTGGCGGCAGGAAGTGTGGTTTGTTTCAAGTGAAGTGCTCTGGCTCGGCGAATTCCCACAGCAGCATCAACCACTATCATAGCAAAGAGAAAGACCCTTTTCTGGACCTGCACCCTGAGGTTTCACTGCTGAGAGGAGACGGAAGCCCCAGGCCGAGAAAGGATGCGTCGGCTGGTGGAAATGTGGCTGAGAGCTTAGACGATGTGGTTACTCCAAATAATTATAATGAGGCGAAGATTAAAGTCATTGGTGTGGGTGGTGGCGGGTCAAATGCAGTCAACCGTATGATTGAGAGCTCCATGAACGGTGTGGAGTTCTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCGCCTGTCTTTCCTGATAACCGCTTGCAAATTGGGCAAGAGCTTACGCGGGGTCTTGGCGCCGGTGGTAACCCGGAGATTGGCATGAATGCTGCTAAAGAGAGTAAAGAGTCAATACAGGAGGCGGTTTATGGGGCTGATATGGTCTTTGTTACTGCTGGAATGGGTGGAGGAACTGGGACTGGTGCAGCTCCAGTTATTGCTGGTGTCACAAAATCAATGGGTATACTGACTGTTGGTATTGTCACAACCCCTTTCTCATTTGAAGGACGAAGGAGGGCAGTTCAAGCACAAGAAGGAATTGCAGCCTTACGAGATAATGTTGATACGCTGATAGTAATTCCAAATGACAAGCTGCTGACTGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAAGGTGTTCGTGGCATATCTGATATTATTACGATACCGGGGTTGGTGAATGTAGATTTTGCCGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCGCTTATGGGGATAGGAACTGCAACTGGGAAAACAAGGGCAAGAGATGCTGCATTAAATGCTATACAGTCACCTTTACTAGATATTGGTATAGAGAGGGCTACTGGAATTGTATGGAACATAACTGGTGGAAGTGATCTGACCTTGTTCGAGGTAAATGCTGCAGCAGAAGTTATATATGACCTTGTGGACCCCACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTAAGCATCACATTAATCGCCACTGGATTCAAGCGTCAAGAGGAAAGTGAAGGGAGACCCGTACAGGCCAGTCAACTCACACAGGGAGATACCATTGGTATCAATCGGAGACCTTCCCCATTCACTGACGGCAGTTTGGTTGAGATCCCTGAATTCTTAAGGAAGAAAGGACGATCCCGCTATCCAAGAGTTTAA 1473 0.4657 MSLDSVRMATCFAPSNARNSAGVLAVVGGRTLLESHNSRPCFLKMQENKWGVFGGGRKCGLFQVKCSGSANSHSSINHYHSKEKDPFLDLHPEVSLLRGDGSPRPRKDASAGGNVAESLDDVVTPNNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDVQAMRMSPVFPDNRLQIGQELTRGLGAGGNPEIGMNAAKESKESIQEAVYGADMVFVTAGMGGGTGTGAAPVIAGVTKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPVQASQLTQGDTIGINRRPSPFTDGSLVEIPEFLRKKGRSRYPRV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0707 490 Gene3D Tubulin/FtsZ, GTPase domain 121 341 IPR036525 -
Lja1g0707 490 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 8 488 - -
Lja1g0707 490 Pfam Tubulin/FtsZ family, GTPase domain 132 293 IPR003008 GO:0005525
Lja1g0707 490 MobiDBLite consensus disorder prediction 440 460 - -
Lja1g0707 490 Hamap Cell division protein FtsZ [ftsZ]. 128 459 IPR000158 GO:0003924|GO:0005525
Lja1g0707 490 SMART Tubulin_C_4 328 445 IPR018316 -
Lja1g0707 490 SUPERFAMILY Tubulin nucleotide-binding domain-like 131 329 IPR036525 -
Lja1g0707 490 ProSitePatterns FtsZ protein signature 2. 218 239 IPR020805 GO:0005525
Lja1g0707 490 Gene3D - 342 451 IPR037103 -
Lja1g0707 490 TIGRFAM ftsZ: cell division protein FtsZ 126 449 IPR000158 GO:0003924|GO:0005525
Lja1g0707 490 Pfam FtsZ family, C-terminal domain 343 437 IPR024757 -
Lja1g0707 490 PRINTS Cell division protein FtsZ signature 219 239 IPR003008 GO:0005525
Lja1g0707 490 PRINTS Cell division protein FtsZ signature 310 332 IPR003008 GO:0005525
Lja1g0707 490 PRINTS Cell division protein FtsZ signature 247 268 IPR003008 GO:0005525
Lja1g0707 490 PRINTS Cell division protein FtsZ signature 333 354 IPR003008 GO:0005525
Lja1g0707 490 SMART Tubulin_4 132 326 IPR003008 GO:0005525
Lja1g0707 490 MobiDBLite consensus disorder prediction 445 460 - -
Lja1g0707 490 SUPERFAMILY Tubulin C-terminal domain-like 325 439 IPR008280 -
Lja1g0707 490 CDD FtsZ_type1 143 435 IPR000158 GO:0003924|GO:0005525
Lja1g0707 490 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 8 488 IPR045061 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0707 Lja-Chr1 6790400 6796806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0707 222 430 PP2C-type Phosphatase Gene Family AT1G75010 22.973 9.29e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0707 K03531 - gmx:100793382 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0707 1 6790400 6796806 Lja1g0707 1 6790400 6796806 ECH