Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g0689 | ATGCTAGGAAAGACAAAAATGGTGTCAATTAAGAAACTAGCAAAAAAAGTGAAGGTTGTGGGTGGAGTTGACCCTGACCGAGGTCATTTGCTAGAGGGATACAAGGAAGAAGAAAACTCAACCAAGCAGACAACCCCAACTGGATTTTTTGCAATTTATGTTGGGGAGGAGCGGCAGAGACAAGTGGTTCCAACCCGGTACCTTTCTCATCCTCTGTTCAAGATGCTGCTGGAGAAGGCTTATGATGAATTTGGGTTTGATCAGAGGAATGGCCTGGTAGTTCCGTGCGGTGTTTCTGCATTTCAGGAAGTAGTGGATGCTATAGAATGCAACAATGGCAAGTTTGACTTGGGGAAAATCTTAGCTGAAATTGTTTGA | 378 | 0.4392 | MLGKTKMVSIKKLAKKVKVVGGVDPDRGHLLEGYKEEENSTKQTTPTGFFAIYVGEERQRQVVPTRYLSHPLFKMLLEKAYDEFGFDQRNGLVVPCGVSAFQEVVDAIECNNGKFDLGKILAEIV* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g0689 | 125 | Pfam | Auxin responsive protein | 33 | 107 | IPR003676 | GO:0009733 | |
| Lja1g0689 | 125 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY | 3 | 124 | - | - | |
| Lja1g0689 | 125 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 3 | 124 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g0689 | Lja-Chr1 | 6602627 | 6603004 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lja1g0689 | 46 | 111 | Calmodulin-binding Proteins | AT5G20810 | 53.030 | 6.64e-20 | 79.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g0689 | K14488 | - | gmx:100790208 | 162.54 |
Event-related genes