Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0661 ATGGGCAAGAAAATGAAGCTCATCCCTTCTCTTCTCATGAGAATCACAGAACTTAACAACAATAACAACAAGTCTTCTTCCTCTTCCTCCTCCTCCTCTTCTTCATGGCCTTGGCCATCTTGTCATCAACAACCCAGAACACTCTCTTTCAGAGCCGTCAATTCAGCATACCTGGATGCCACCATGGACATGCTTGAAACCTCAGAGTCCTTCTTCACTGTCTCACCGGAGTCCGCCAGCTTCTCAACCACCGCCGCCGCCTCCGATGAATTAGAACATTCCAGAACAAGAGGATCAGACTCTGTGGAGACCGTGATCCGCGGCTTGCGTTCCGCGGACCGCTTGTTCTTCGAGCCGGAAAAGACCAGCTCCATACTGGAGACTAAAGCAGCCGGAACGGCGACGGCGACCTTGCCACCGTTCAAAGATAGCGTGGTGCTGTCCGTGGACTCACGAGATCCTTACGTTGATTTCAGGAAGTCCATGGAGGAGATGGTGGAGGCTCATGGAGTGAAAGATTGGGAGCATCTTCAAGAGCTTTTGTGTTGGTATTTGAGGGTCAATGATAAAACCAACCATGGATATATTGTTGGTGCTTTTGTTGATTTGTTGGTTGCTATTGCATTTGCTACTTCATTGTCGACCACTTCAAGTTCAACCTCTACTTCTTCTTCTTCAACTTCCACTTCCCATTCTCCTTCCTCTCCTTTATCATTTTATAGTTCCAATTCTGCTTCGTCTTCTTCTTGTAGAACTCGTTGTGTTTCTTGTTTGGAGGAGGTTGATGCTCCTAGTCCTAGTTCATCTTTGTTGTTAGAACAAGTTAGGGAGGAGATTAATCTGGAAGATGAGGTTTTGTCTTCGTCTTCATCTTCAAATACTTGA 885 0.4644 MGKKMKLIPSLLMRITELNNNNNKSSSSSSSSSSSWPWPSCHQQPRTLSFRAVNSAYLDATMDMLETSESFFTVSPESASFSTTAAASDELEHSRTRGSDSVETVIRGLRSADRLFFEPEKTSSILETKAAGTATATLPPFKDSVVLSVDSRDPYVDFRKSMEEMVEAHGVKDWEHLQELLCWYLRVNDKTNHGYIVGAFVDLLVAIAFATSLSTTSSSTSTSSSSTSTSHSPSSPLSFYSSNSASSSSCRTRCVSCLEEVDAPSPSSSLLLEQVREEINLEDEVLSSSSSSNT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0661 294 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 248 IPR038933 GO:0045892
Lja1g0661 294 MobiDBLite consensus disorder prediction 216 247 - -
Lja1g0661 294 ProSiteProfiles OVATE domain profile. 146 206 IPR006458 -
Lja1g0661 294 Pfam Transcriptional repressor, ovate 151 207 IPR006458 -
Lja1g0661 294 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 5 248 - -
Lja1g0661 294 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 146 207 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0661 Lja-Chr1 6151362 6152354 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja1g0661 Ovate 3.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0661 - - gmx:100784899 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0661 1 6151362 6152354 Lja1g0661 1 6151362 6152354 ECH