Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0660 ATGTCTTCTTCTAGCTCCAGCAGAAAAAAGCTTCACCTGAACAACGTGTCTGTGAAACTAGGTTGTGGTAGCTGCAGCAGGAGACCAAAGCTGTTCCGCTTACTATTCCAAACAAAACCAAAGAACCCCACTTACCAGAAACACAAACTTTACAACTATGACTGCAGCACCAGCACCCCCACCACCACAAACACCACCACCACCACCGCAACCACATTCTCTCCTTGCTACGTTGATTCCTCACAGCAGTTTTCCGATTCAGAGACTTACAAGGCCACAAGGACAGTGGGTGGTTTAGGCAGAGCAGGCAGAGAAGGCGTGGCGGTGGAGAAAGACTCCGATGACCCTTATCTGGATTTCCGGCGTTCCATGCTTCAGATGATTTTGGAGAATGAGATTTACTCCAAAGATGACCTCAGAGAGCTTCTGAATTGCTTTCTTCAGCTGAACGCACCATATCACCATGGTGTCATAGTCAGAGCTTTCACTGAGATCTGGAATGGAGTTTTCTCTGTCAGGTCCAACTCGCCCAGGTTCCATAAGCCACGTGAGTTCTGA 558 0.4839 MSSSSSSRKKLHLNNVSVKLGCGSCSRRPKLFRLLFQTKPKNPTYQKHKLYNYDCSTSTPTTTNTTTTTATTFSPCYVDSSQQFSDSETYKATRTVGGLGRAGREGVAVEKDSDDPYLDFRRSMLQMILENEIYSKDDLRELLNCFLQLNAPYHHGVIVRAFTEIWNGVFSVRSNSPRFHKPREF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0660 185 ProSiteProfiles OVATE domain profile. 109 168 IPR006458 -
Lja1g0660 185 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 107 167 IPR006458 -
Lja1g0660 185 Pfam Transcriptional repressor, ovate 113 169 IPR006458 -
Lja1g0660 185 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 174 IPR038933 GO:0045892
Lja1g0660 185 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 7 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0660 Lja-Chr1 6140375 6141262 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja1g0660 Ovate 8.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0660 - - mtr:MTR_7g105790 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0660 1 6140375 6141262 Lja1g0660 1 6140375 6141262 ECH