Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0652 ATGTCAAACCTGAACGGAGCTTATTACGGCCCCGCCGTCCCTCCGCCCAAAAAAACCTACCACCGCCCAAGCCGAGGCGGCGGCGGATGCTTCGAGTGCTGCTGCGGCTGCATCTTCAGCCTCATCTTCAAACTCATCTTCACCGCCCTCATCATCATCGGCATCGCCGTCCTCATCTTCTGGCTCATCGTCCGCCCCAACGTCGTGAAGTTCCACGTCACCGACGCCACGCTCACGCAGTTCAACTTCACCGGAAACAACACGCTCAACTACGATCTCACCCTCAACATCACCGTCCGCAACCCAAACAAGCGCCTCGGGATCTACTACGACTACATCGAAGCGCGTGCGATGTACCAAGACGTTAGGTTTGATACCGAATTCTTCGATCGGTTCTACCAGGGACACAAGAAAACCAACGTGATCAGTCGCCAGTTTAAGGGTACGCATGTGGTGCCGCTCGGTGCTGAGGAGACGAAGGAGTTGAATAAGGATAAGGAAGATGGGGTTTATGGGATTGATGTGAAGATGTATCTGAAGGTGAGATTCAAATTGGGCGTTTTCAAGACCAAGACGCTTAAGCCCAAGGTTACTTGTGAGCTGCGCGTTCCTCTGAAATCCGCCGGTGGCGGTGGTGGTGGTGGCGGCTTTGAAGTCACCAAGTGCGACTGGGATCGTTGA 681 0.5433 MSNLNGAYYGPAVPPPKKTYHRPSRGGGGCFECCCGCIFSLIFKLIFTALIIIGIAVLIFWLIVRPNVVKFHVTDATLTQFNFTGNNTLNYDLTLNITVRNPNKRLGIYYDYIEARAMYQDVRFDTEFFDRFYQGHKKTNVISRQFKGTHVVPLGAEETKELNKDKEDGVYGIDVKMYLKVRFKLGVFKTKTLKPKVTCELRVPLKSAGGGGGGGGFEVTKCDWDR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0652 226 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 26 224 - -
Lja1g0652 226 Pfam Late embryogenesis abundant protein 96 199 IPR004864 -
Lja1g0652 226 PANTHER OS05G0367900 PROTEIN 26 224 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0652 Lja-Chr1 6060394 6061596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0652 63 215 SNARE and Associated Proteins AT1G32270 38.562 3.71e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0652 - - gmx:100793187 338.191