Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0651 ATGGCCAATGACCAACAGCCGTTGAACGGCGCCTACTACGGCCCCGCCATTCCGCCGTCAGGGCAACCACGCCACAGCCACCATCGTGGCAGAAGCTGCTTCTGCTGCCTCTTCGGCGTCTTCTGGAAGATTCTCATAACACTCATCGTCCTGGTTGGCCTCGTAATTCTCATCTTCTATCTCATAGTTCAACCCCGCCCCTTCAAATTCTATGTCAATGAAGCCAAATTAACCGAATTCAACTACACCAACAACTCCCTCCGCTACAACATGGTGCTCAACTTCACCGCCCGCAACCCCAACAAGAAACTCAATATTTACTACGACAAGGTGGAAGCTTTAGCATTCTACGAGGATTCCAGGTTCGCCAGTGATGATAAAGTCATCACCCACATGAACTCATTCCGTCAATACAAGAAGAGCAGCAGCCCCATGAGCGCCACTTTCTCAGGCCAGCATGTGATGGTGCTCGACAGTGATCAGCTTTCAGAGTTAAGCAAAGATAAGAGTGCTCATGTTTATGACATTTATGTGAAGCTTCACTTCAGGATCAGGTTCAGGCTCGGGGATTTCATATTCAATAACGACCTCAAGCCCAAGGTCAAATGTGATCTCAAGGTTCCCTTGGATTCTAATGCTACCTTCACTTTCTTTGCGGTTACCAAGTGCGATGTTGATTTCTGGAACTGA 690 0.4826 MANDQQPLNGAYYGPAIPPSGQPRHSHHRGRSCFCCLFGVFWKILITLIVLVGLVILIFYLIVQPRPFKFYVNEAKLTEFNYTNNSLRYNMVLNFTARNPNKKLNIYYDKVEALAFYEDSRFASDDKVITHMNSFRQYKKSSSPMSATFSGQHVMVLDSDQLSELSKDKSAHVYDIYVKLHFRIRFRLGDFIFNNDLKPKVKCDLKVPLDSNATFTFFAVTKCDVDFWN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0651 229 Pfam Late embryogenesis abundant protein 95 202 IPR004864 -
Lja1g0651 229 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
Lja1g0651 229 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0651 Lja-Chr1 6057429 6058478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0651 62 214 SNARE and Associated Proteins AT1G32270 31.847 7.27e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0651 - - gmx:100807701 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0651 1 6057429 6058478 Lja5g2429 5 46532818 46533935 PCT