Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0650 ATGGGCAATGACCAACAGCCGTTGAACGGCGCCTACTACGGCCCTGCCATTCCGCCGTCAGGGCAACCACGCCAAAGCCACCACCGCGGCAGAAGCTGTTTCTGCTGCCTCTTCGGCGTCTTATGGAAGATTCTCATAACACTAATCGTCCTTGTTGGCCTCGCAGTTCTCATCTTCTATCTCATAGTTCAACCCCGCCCCTTCAAATTCTACGTCAATGAAGCCAAATTAACTCAATTCGACTACACCAACAACACACTCCGCTACAACATGGCTCTCAACTTCACTGCACGCAACCCCAACAAGAAACTCAGCATCTACTACGACAAAGTGGAGGCTTTAGCATACTATGAGGATTCCAGGTTCGCCAGTGATGATGTCATCACCCACCTGAACTCATTCCGGCAGTACAAGAAGAGCAGCAGCCCCATGAGCGCCACATTCTCCGGCGAACGAGTGATGCTACTCGACAGTGATCAGCTTTCAGAATTAAGCAAAGACAAGAGTGCTGGTGTTTATGACATCTTTGTGAGGCTCAACTTCAGGATCAGGTTCAGGCTCGGGGATTTGATATCCGGCGACTACAAGCCTAAGGTCAAATGTGATCTCAAGGTTCCCTTCAGTAACAATGCGACCTCCACTTTCTTTGCGGTTACCAAGTGCGATGTTGATTTCTGGAACTGA 684 0.4971 MGNDQQPLNGAYYGPAIPPSGQPRQSHHRGRSCFCCLFGVLWKILITLIVLVGLAVLIFYLIVQPRPFKFYVNEAKLTQFDYTNNTLRYNMALNFTARNPNKKLSIYYDKVEALAYYEDSRFASDDVITHLNSFRQYKKSSSPMSATFSGERVMLLDSDQLSELSKDKSAGVYDIFVRLNFRIRFRLGDLISGDYKPKVKCDLKVPFSNNATSTFFAVTKCDVDFWN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0650 227 Pfam Late embryogenesis abundant protein 95 198 IPR004864 -
Lja1g0650 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 223 - -
Lja1g0650 227 PANTHER OS05G0367900 PROTEIN 18 223 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0650 Lja-Chr1 6051276 6052384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0650 62 212 SNARE and Associated Proteins AT1G32270 32.903 2.39e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0650 - - gmx:100807701 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0650 1 6051276 6052384 Lja1g0650 1 6051276 6052384 ECH
Lja1g0650 1 6051276 6052384 Lja5g2426 5 46445580 46447268 PCT