Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0605 ATGGGGGATTCTGCAAGAAATGCATGCTACAATGTATCTGTGATTCATCCCAATCGAATCTGGCAAACAGATAATGTTGTAAAATCAGAGCTCAGTGTTCTCGCCTTTCAAATTTGCTTCACTGCATTCTTCTCTAGTATTTTCTTCTACATCTATAAACGCCTCCTACAACCACGTCTACTTTCCCAAATCGCTGTTGGCTTCATCCTAACGAGCCCATTTATAGGGAATTACGCATCTGTTTTTCAGTTCATTTATCCTGTAAGAGGGGTCATAAACATTGAAGTGCTAGGAAACCTTGGATTGATATTCTACTCATTCCTCAGTGGGTTGGAAATGAACTTGAATACCATTCTAAATGCCAATAAGAAAGCCAAAAGCATCGCCGTTGCTGGGATCGCGTTTCCCATGGTGATGGCACCAACCTTATATGTTATGCATCGAAAAGTTTACATGGGACCTGTTTTCTACAAACTTGAAGAAGACACAACTCATGCTTATTTACTTTGGACTCTAGTTATCACTGTAACAGGTTTTCCAGTCGTAGCTCAGTCCCTTTCTGATCTCAAGCTCCTACATACGGGTCTCGGCAAAACTGCTTTAACAGCAGCCATGATTAGTGATTCCTATGCATGGATTCTTTTCACATTAGTGGTTCCATTTTGTATTAATGCTAAAGGAGCAATGTACGCAGTGGTATGTACCATAGTATTCATTATCTTTAGCGTCTTTGTGCTACATCCTGTCGTCGAAAAGTATATTAACCAAAAGACCGAAAATGATGACTGGAACGACAGGGAGCTAGTCTTTGTGGGGATGGGGGTCTTAGCTTTTTCATACTTAACAGATCTTCTTGGAACCCATGGGATTGTTGGTGCTTTTGTGTATGGACTCATTCTACCTCATGGAAAATTTTCTGACATGGTTATGTCAGCTACAGATGATTTTGCTACTGGGTTTCTGGCACCAACCTACTTCGCTGGAGTTGGACTAAGACTCACATTACCAGCTATTTTTAACCAAGATAATTGGCACTTGACATTGCTAGTTGTACTCTTGCTGTGTGTTCCAAAGATTTTAAGCACTTTGTTCACTGGTTTCTTCTTCGGCATGCGCAACCAAGAAGGTCTAGCTCTGGGCTTGATTATGAATACCAAGGGTGCCATGGCATTGATCATGCTAAACATTGCTTGGGATAGAGGGATATTATCTCCAGCAACCTACACTGTTATTACCTCTGCTGTTCTCCTAATGACTGCAGTGGTGTCTCCAATCCTTAACATCATGTACAAGCCTAGAAAGATATTTGGGCAGAATAAGCTAAAGACAATACTAAAGCTAAGACCTGATGCAGAGCTTCGAATTCTGGCGTGTGTCCACAATACTCGCCAAGCCACCGGCATGATCAAGTTAATTGAATCCTTTAATGCGACAAGACTTTCTCCGTTACATGTTTTTGCACTCTACCTTATCGAGTTCACCAAACGCGGTGCTGCGCTTGTTGCTGCCCACATGGAGAAGCCTAACCATCATAACGGAGTGCAAAACCTGACCACAACACAGGCAGAGTTAGAGAACATTACTAGCATGTTCGTAGAATACGGAGAGAAACATGATGCTGCAAGAGTCCATACATTAAGTGTCATGTCAAACTACAACACCATTCATCAAGACATACACTTCACAGCAAATGAGAAACACACAAGCCTAATTCTCCTTCCATTCCATAAACATTTATCTTCAGAAAGGGTGTTAGAGATAACTAGTCCTGTATATAGAGATATAAACCAAATGGTAATGCATGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTTTTCCTGGGAACTTACCGGAAAATAATTTCCACATTCTCATGCTTTTTATTGGTGGTCCTCATGACCGTGAAGCACTGGCTGTTGCGCGGAGGATGGCGGGGAAGGCAGGAGTCACGCTTACGGTGGTTCGATTCATATTTCTTGATGAATTAGCAGAGGTGGATACAAAAAGTTACCCTGAAGAGCAAGAGTTTTTATCTTTTATGATGGACATTGAGCAACAGAGAGAGTTGGATGATGAGTACGTGAGTTCATTCAGACTCAAAACAGTGAATATGAGTGATGATTCTATATCCTACTCAGAGATTGGTGTACATTCGATTACTGATATCAACACAGTCCTGAATGAGATAGAAAACAATGGCTGCGATTTATACATAGTTGGACAAGGAAATTTTAAGAACTCCCGTGTGTTCTCGAATTTATTGGTGTGGTCTGATTGCCCAGAACTTGGAGTTATGGGGGATATTCTTGCGTCAAAGGATTTTAGTCCACGTTCATCTGTGTTGGTTGTGCAGCAGTATGGGTTTGGAGGATTGGTTTCTGGAAAAGATCCTAACCTTGTGAGGGTTCAAGTTGCTTGA 2424 0.415 MGDSARNACYNVSVIHPNRIWQTDNVVKSELSVLAFQICFTAFFSSIFFYIYKRLLQPRLLSQIAVGFILTSPFIGNYASVFQFIYPVRGVINIEVLGNLGLIFYSFLSGLEMNLNTILNANKKAKSIAVAGIAFPMVMAPTLYVMHRKVYMGPVFYKLEEDTTHAYLLWTLVITVTGFPVVAQSLSDLKLLHTGLGKTALTAAMISDSYAWILFTLVVPFCINAKGAMYAVVCTIVFIIFSVFVLHPVVEKYINQKTENDDWNDRELVFVGMGVLAFSYLTDLLGTHGIVGAFVYGLILPHGKFSDMVMSATDDFATGFLAPTYFAGVGLRLTLPAIFNQDNWHLTLLVVLLLCVPKILSTLFTGFFFGMRNQEGLALGLIMNTKGAMALIMLNIAWDRGILSPATYTVITSAVLLMTAVVSPILNIMYKPRKIFGQNKLKTILKLRPDAELRILACVHNTRQATGMIKLIESFNATRLSPLHVFALYLIEFTKRGAALVAAHMEKPNHHNGVQNLTTTQAELENITSMFVEYGEKHDAARVHTLSVMSNYNTIHQDIHFTANEKHTSLILLPFHKHLSSERVLEITSPVYRDINQMVMHDAPCSVGIFVDRFPGNLPENNFHILMLFIGGPHDREALAVARRMAGKAGVTLTVVRFIFLDELAEVDTKSYPEEQEFLSFMMDIEQQRELDDEYVSSFRLKTVNMSDDSISYSEIGVHSITDINTVLNEIENNGCDLYIVGQGNFKNSRVFSNLLVWSDCPELGVMGDILASKDFSPRSSVLVVQQYGFGGLVSGKDPNLVRVQVA* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0605 807 Gene3D - 32 435 IPR038770 -
Lja1g0605 807 PANTHER CATION/H+ EXCHANGER 3 11 799 - -
Lja1g0605 807 PANTHER CATION/H + ANTIPORTER 11 799 - -
Lja1g0605 807 Pfam Sodium/hydrogen exchanger family 40 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja1g0605 807 Gene3D - 451 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0605 Lja-Chr1 5570352 5573323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0605 9 788 Antiporter Super Family AT2G13620 35.272 4.05e-165 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0605 - - gmx:100804266 1063.14