Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0601 ATGGATTCTCTTCCCCACGTAGTAGAGGACTGCATGGGCTTCCTCCAACTCTTCAGCGACGGCTCCGTCCACCGTTCCAACGACATCAAATTCCACGCCGCCGCCGTCGAAGACAACTCTGTCACCTTCAAGGACTGCCTCTTTGACAAGAAATTCAACCTCTCTCTCCGCCTCTACAAACCCTCTTCACAAAACACCAACAACAGCAATCACAACAAGAACATGAAACTTCCTATGATTATGTTTCTCCACGGTGGAGGCTTCTGTTTTGGCTCGCGCACGTGGCCCCACATTCACAACTGCTGCATGCGCCTCGCCTCGGGCCTCCAGGCCATGGTGGTTGCGCCGGACTACCGCCTTGCCCCGGAGCACCGGCTTCCTGCGGCAGTGGACGACGCCGTGGAGGCCGTGAGGTGGCTACAGAGGCTAGGGCTGAGCTTCAAGGAGGGTGGTGGGGATGAGTGGTTGAGTCGCTGCGGCGTTGACTTTGACCGCATGTTCATCATGGGTGACTCGTCTGGCGGGAACATCGCGCACCATCTAGCGGTTCAGTTCGGACCCGGTTCGCATGAGCTGGACCCGGTTCGGATACGTGGTTACGTTTTGTTGGCGCCGTTTTTTGGTGGCGAGGTTCGAACCAAGTCCGAGGAAGGTCCTCCTGAACGAGTGTTGGACCTGGATTTATTAGACAGATTTTGGAGGCTGTCAATGCCAGTTGGAGTGAGCAGAGACCACCCATTGGCGAATCCTTTCGGACCAGATAGTCCAAATCTTGGAGAACTAAATCTTGAGCCAATTTTGGTGATAGTTGGAGGTAATGAATTGCTAAAGGATAGAGCAGCAGATTATGCAACAAGGTTAAAAGAACTAGGAAAAGACATCAAATACATTGAGTTTGAGGGTAGTGAGCATGGATTTTTCACCCATGATTCGTACTCAGAAGTTTCGGAAGAAGTCATCCAAATCCTCAAACAATTCATACTTGAAACTTCTAGTTAA 999 0.5155 MDSLPHVVEDCMGFLQLFSDGSVHRSNDIKFHAAAVEDNSVTFKDCLFDKKFNLSLRLYKPSSQNTNNSNHNKNMKLPMIMFLHGGGFCFGSRTWPHIHNCCMRLASGLQAMVVAPDYRLAPEHRLPAAVDDAVEAVRWLQRLGLSFKEGGGDEWLSRCGVDFDRMFIMGDSSGGNIAHHLAVQFGPGSHELDPVRIRGYVLLAPFFGGEVRTKSEEGPPERVLDLDLLDRFWRLSMPVGVSRDHPLANPFGPDSPNLGELNLEPILVIVGGNELLKDRAADYATRLKELGKDIKYIEFEGSEHGFFTHDSYSEVSEEVIQILKQFILETSS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0601 332 PANTHER ARYLACETAMIDE DEACETYLASE 4 328 - -
Lja1g0601 332 SUPERFAMILY alpha/beta-Hydrolases 3 327 IPR029058 -
Lja1g0601 332 Gene3D alpha/beta hydrolase 16 331 IPR029058 -
Lja1g0601 332 Pfam alpha/beta hydrolase fold 80 307 IPR013094 GO:0016787
Lja1g0601 332 PANTHER CARBOXYLESTERASE 15-RELATED 4 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0601 Lja-Chr1 5517889 5522098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0601 7 321 Carbohydrate Esterase AT5G16080 34.688 4.78e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0601 - - gmx:100803077 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0601 1 5517889 5522098 Lja1g0601 1 5517889 5522098 ECH
Lja1g0601 1 5517889 5522098 Lja5g2379 5 45011062 45013358 PCT