Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0551 ATGGATCGGGAAGGAGGATCCAACGGCGGCGGATCTTGCTACTACTCCGTTCTCGGGATTCGCAGAGACGCTTCCTCCTCTGATATTCGCACTGCTTACCGGAAACTCGCCATGAAGTGGCACCCGGACAGGTGGACGCGGAACCCTGCGACGGCCGGAGAAGCGAAGCGGCGGTTTCAGGAGATTCAGGAAGCGTACTCAGTTCTCTCCGATCAGTCGAAGAGATCAATGTACGATGCGGGGCTGTATGATCCTCTTGAGGAAGAAGACCAAGGATTTTGTGAATTCATGAATGAGATGATCTCAATGATGAACAATGTCAAAGACGAGGGGGAAAGTTTGGAGGACTTGCAAAGGATGTTTGTTGAGATGGTTGGTGGAGATGGGATGAGCTTTGACTTGGACCAGGATCAGACGGCTGGGAAGAGGGCACGCGGCAGTGGATCGAAGGGCAGCGCAGCCCAGCGTAGCACCTCTTGCCGATAG 486 0.5412 MDREGGSNGGGSCYYSVLGIRRDASSSDIRTAYRKLAMKWHPDRWTRNPATAGEAKRRFQEIQEAYSVLSDQSKRSMYDAGLYDPLEEEDQGFCEFMNEMISMMNNVKDEGESLEDLQRMFVEMVGGDGMSFDLDQDQTAGKRARGSGSKGSAAQRSTSCR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0551 161 Gene3D DnaJ domain 12 136 IPR036869 -
Lja1g0551 161 PANTHER PUTATIVE, EXPRESSED-RELATED 12 150 - -
Lja1g0551 161 Pfam DnaJ domain 14 79 IPR001623 -
Lja1g0551 161 SUPERFAMILY Chaperone J-domain 13 89 IPR036869 -
Lja1g0551 161 CDD DnaJ 13 71 IPR001623 -
Lja1g0551 161 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Lja1g0551 161 MobiDBLite consensus disorder prediction 142 161 - -
Lja1g0551 161 PRINTS DnaJ domain signature 15 33 IPR001623 -
Lja1g0551 161 PRINTS DnaJ domain signature 54 74 IPR001623 -
Lja1g0551 161 PRINTS DnaJ domain signature 33 48 IPR001623 -
Lja1g0551 161 PRINTS DnaJ domain signature 74 93 IPR001623 -
Lja1g0551 161 SMART dnaj_3 12 74 IPR001623 -
Lja1g0551 161 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Lja1g0551 161 PANTHER PUTATIVE, EXPRESSED-RELATED 12 150 - -
Lja1g0551 161 MobiDBLite consensus disorder prediction 132 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0551 Lja-Chr1 5011142 5012737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0551 13 80 C2H2 Transcription Factor Family AT1G74250 43.478 2.54e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0551 - - mtr:MTR_7g112360 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0551 1 5011142 5012737 Lja1g0551 1 5011142 5012737 ECH