Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0515 ATGGGCGGAGGTGCGAACGCGGCGGAGGCACAGTACTCGACGGCGAAGATTTCGGTCTGGTGGGACATAGAAAACTGCCATGTTCCCAAGGGCTCCGAGCCACACGCCATCGCTCAGAACATCAGTTCCGCCCTCGTTCGCATGAACTACTGTGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACGCGCATCCCTCAAACTGTACAGCACGCTCTCTCCAGCACCGGAATCTCCCTCAACCACGTCCCTGCCGGTGTGAAAGATGCAAGTGACAAGAAGATTCTTGTGGATATGCTGTTTTGGGCAGTGGACAATCCGGCACCGGCGAATTATTTATTAATTTCGGGTGATCGAGACTTCTCTAACGCGCTCCATCAACTGCGGATGAGGAGATATAATATTCTTCTTGCGCAGCCTCAGAAAGCGTCTGCGCCGTTGGTTGCGGCGGCCAAGAGCGTGTGGCTATGGACTACTCTCTTAGTTGGAGGTCCTCCTTTGAGTAATGGTGAATCACAACTTGGTAATAGTAGCTTCGTATCGTCTTCTGAAACGTTACAAATTCCGGTTAGCAATGCCCCTCAGATACAGCAGCAGCAGCAACAACAGACAGAGTCGTATTCTGATGTTCATGCAGGAAATACAAACTTTTCAAATGGTGGCGGTAGGGGATTTGATCCTAGATATCAAGGGAGGCCAAATTGGAGAAACCCGACTCAACAAAATGGACCTAGAGCCATGATTCCGCCAGTTGGACTTCAAGACAATCGAAATAACAGTAACTCTTATCGACCTGGCAACTATAATCCAAATGTTCCACTTAGCGGATCTGCTACAAATTTTGTTCATGGAAATCCTGATCAGTTACGGAACAATAACAGTAATCCACAGGGAAATCTTCAAACTCCTTATTCCCAGACATTAAGACAAAACAGTTTTCCAATGCAACAACCACCTTTTGCACCTAATAATTCATATTCTGGAAATTCCCGTGCTTTCGCAACTTCACCGGTGCCGCCTAGGAATGGTGGTCCCAACTTCACAACAGGGCCACTTAAAAACACGCCAGATATTGGAAATCTGAACATTTCTGGCTATCCCAATAGTGTTCATAATCCACGGACCATTCCACAACGGAATGGAGAGTTGAAGCAGAATAACAACAGTAATGCTCCACTTCCTGTAAGACCAACTGATGAACCAAATGGACATATAGTACACAACAGTAGCACGCAAGGCTATCCTCATGGTCCAGATTATCAACCTAAAAAATTGGCAGCAGGGGTCAATAACAACCTTCCTGGCAATGGTACTTGGGGATCTCCAGGAAACCCTAAACCTTCTGAATATGTACAAGGGCTTATAGGGGTTGTTTTACTTGCCTTGAACTCACTAAAAATTGCAAAGATGCTACCAACTGAGATGAATATAACTGATTGCATCCGTTATGGAGATCCGAAGCACCGTAACACTGATGTTAAGAAGGCTCTTGAGTGTGCGATTGAGAAGCAAATGGTAGTGAAACAGAATTTAGGTGCTTTGCTATTGTATGTTGGTAAGCATGATAAACTTTGGAATTGTGTAAATCTAATAGCTGGTAACCCTAAGCAACACTCAAAAGAAACGTGGGATGAAATTGAAAAGTTTTTAACAACTTCTGATGGAAGATCAGCAATCATGGCTACACAATGCAAGTATGAAGCAGGTTTGGTGATAAAGAACATGTGCTTTAAAGATCTTGCTTTGGGGGATGTGCTTCAGATATTAAACATGGTGATTGCCCATAAGAAATGGATTGTGCATCCCCAGTCTTGCTGGCAACCACTTATGATTACTATTCCTGAGTCAAACTCTGATTCAGGGTGGTAG 1869 0.451 MGGGANAAEAQYSTAKISVWWDIENCHVPKGSEPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPQTVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLVGGPPLSNGESQLGNSSFVSSSETLQIPVSNAPQIQQQQQQQTESYSDVHAGNTNFSNGGGRGFDPRYQGRPNWRNPTQQNGPRAMIPPVGLQDNRNNSNSYRPGNYNPNVPLSGSATNFVHGNPDQLRNNNSNPQGNLQTPYSQTLRQNSFPMQQPPFAPNNSYSGNSRAFATSPVPPRNGGPNFTTGPLKNTPDIGNLNISGYPNSVHNPRTIPQRNGELKQNNNSNAPLPVRPTDEPNGHIVHNSSTQGYPHGPDYQPKKLAAGVNNNLPGNGTWGSPGNPKPSEYVQGLIGVVLLALNSLKIAKMLPTEMNITDCIRYGDPKHRNTDVKKALECAIEKQMVVKQNLGALLLYVGKHDKLWNCVNLIAGNPKQHSKETWDEIEKFLTTSDGRSAIMATQCKYEAGLVIKNMCFKDLALGDVLQILNMVIAHKKWIVHPQSCWQPLMITIPESNSDSGW* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0515 622 MobiDBLite consensus disorder prediction 315 353 - -
Lja1g0515 622 CDD PIN_limkain_b1_N_like 16 140 - -
Lja1g0515 622 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 609 - -
Lja1g0515 622 PANTHER LIMKAIN B LKAP 2 609 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lja1g0515 622 MobiDBLite consensus disorder prediction 193 221 - -
Lja1g0515 622 MobiDBLite consensus disorder prediction 369 416 - -
Lja1g0515 622 MobiDBLite consensus disorder prediction 369 395 - -
Lja1g0515 622 MobiDBLite consensus disorder prediction 253 303 - -
Lja1g0515 622 Pfam OST-HTH Associated domain 563 612 IPR025677 -
Lja1g0515 622 MobiDBLite consensus disorder prediction 193 303 - -
Lja1g0515 622 Pfam NYN domain 16 152 IPR021139 GO:0004540
Lja1g0515 622 Gene3D - 8 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0515 Lja-Chr1 4662449 4666826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0515 6 195 C2H2 Transcription Factor Family AT5G61190 70.466 4.82e-83 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0515 - - lja:Lj1g3v4806340.1 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0515 1 4662449 4666826 Lja1g0515 1 4662449 4666826 ECH