Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0485 ATGAGAAACATGAAGCAGCTGATTCTGGTGGTGGCGTTTGCCTTTATTTCTGTGGCTATCTCCGGCACCAGATCTGAGACTGAGACAGAGACACATTCATTCTCTCAATCTCCGCTATCTCTCCTCGAAAACGATGCCGTTTCAGTTTCTCTGGACGCTGCAAAACCTCTACCTCTCATGGTTCCCCTCACTCTCATTCAAGGAGCTGCTTCCAAAGGAGCTGTTTGTTTGGACGGGACGTTGCCTGGTTACCACTTTCATCCTGGATTTGGATCTGGTGCGAACAGTTGGCTTGTTGAATTGGAGGGAGGAGGATGGTGTAACACCATTAGGAACTGTGTCTACAGAAAAACAACTCGTCGTGGTTCCTCAAAATACATGGAAAAGCAACTACCATTTACGGGGATATTGAGCAATAAAGCTGAATATAACCCTGATTTCTTTAACTGGAATAGAGTCAGAGTAAGGTACTGTGATGGTGCATCCTTCAGTGGAGATAGTCAAAATGAGGCTGCACAGCTTCAATTTAGAGGACAAAAAATATATTTAGCTGCAATGGAGGAATTAATGTCTAAGGGAATGAAAAATGCCAACCAGGCTCTTTTGACTGGATGCTCTGCCGGCGGTGTGGCATCTATCATACATTGTGATGAGTTCCGGAGCTTGTTTCCAAAATCTACTAAAGTGAAATGTTTGAGCGATGCAGGTCTTTTTCTTGATGCAGTTGATGTATCTGGGGGGCACACACTGAGGAATCTATTCGGAGGTGTAGTTAGTTTACAGGAAGTGCAAAAAAATCTGCCAAAAAGTTGTCTCAACCAATTGGACCCAACATCGTGTTTCTTTCCTCAAAATTTGATCAAGCATGTTCAGACTCCATTGTTTCTGCTGAATTCAGCTTATGATGCATGGCAGGTACAAGCAAGTTTAGCCCCACCTTCAGCAGATCCCCATGGCTCTTGGACTGCATGTAAATTAAATCACGCAAAGTGTAACTCCTCTCAAATTCAGTTTTTCCAAGACTTCAGAAATGCAATGGTAAATGATGTGAGAGATTTCTCAAGGACACCTCAAACTGGATTATTCATAAATTCTTGTTTTTCTCATTGCCAATCTGAAAGACAAGATACATGGTTTGCTGATGACTCTCCACTTCTTAACAAGATGCCAGTTGCAGTTGCTGTTGGAAACTGGTATTTCGATCGGCAAGCTGTCAAAGAAATTGACTGTCCTTATCCATGTGACAATACCTGCCATAATCTGGTCTTCAAGTGA 1275 0.4275 MRNMKQLILVVAFAFISVAISGTRSETETETHSFSQSPLSLLENDAVSVSLDAAKPLPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGFGSGANSWLVELEGGGWCNTIRNCVYRKTTRRGSSKYMEKQLPFTGILSNKAEYNPDFFNWNRVRVRYCDGASFSGDSQNEAAQLQFRGQKIYLAAMEELMSKGMKNANQALLTGCSAGGVASIIHCDEFRSLFPKSTKVKCLSDAGLFLDAVDVSGGHTLRNLFGGVVSLQEVQKNLPKSCLNQLDPTSCFFPQNLIKHVQTPLFLLNSAYDAWQVQASLAPPSADPHGSWTACKLNHAKCNSSQIQFFQDFRNAMVNDVRDFSRTPQTGLFINSCFSHCQSERQDTWFADDSPLLNKMPVAVAVGNWYFDRQAVKEIDCPYPCDNTCHNLVFK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0485 424 PANTHER PECTIN ACETYLESTERASE 5 423 - -
Lja1g0485 424 Pfam Pectinacetylesterase 58 404 IPR004963 GO:0016787
Lja1g0485 424 PANTHER NOTUM-RELATED 5 423 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0485 Lja-Chr1 4367622 4372646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0485 1 424 Carbohydrate Esterase AT2G46930 64.858 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0485 K19882 - gmx:100785270 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0485 1 4367622 4372646 Lja5g1306 5 13125244 13139234 PCT