Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0472 ATGGCCATGTCTGTGATCAGAACAAAACGAGGCATGGTTAAACCAGCCAAGGAGACTCCATTGACCACACTGGACCTATCAGTCATGGACAGATTACCTGTTCTGAGATGCAATGCTAGAACCTTACACGTGTTTAGACATGGCCCTGAGGCCACAAGGGTCATAAGAGAAGCCTTGTCCCTAGCATTGGTTCCTTACTACCCACTTGCAGGAAGACTCATAGAATCCAAACCACGGTGTCTCCAAATTGAATGCTCAGGTGAAGGTGTGTGGTATGTTGAGGCTTCAGCTGATTGCACCCTTCACTCTGTCAATTTCTTTGATGATGTTCAGTCTATTCCATATGATGATCTTCTTCCTGATCATATTCCTGAAAATGAACATGTTGACCCCCTAGTGCAAATGCAGGTGACAAAATTTGGTTGCGGGGGTTTTGTGATAGGTCTCATGTTCTGCCACAGCATATGCGATGGCCTCGGCGCAGCACAGTTTCTAAATGCTGTTGGGGAGCTAGCTAGAGGACTTAACAAGCCGACCATTGAACCAGCATGGCACAGGGACTTCTTTCCACCCCAAGAAGCTGAAGCTGAAGCACAACCAAACCTTAAGCTATTAGGTCCACCTCCAATGCCAGATTACCAGTTACAACATGCCAACATAGATATGCCCATGGATCAAATCAAACAGCTAAAATCATCATTTGAGCAAGTAACAGGACAGACTTGCTCTGCCTTCGAGATTGTAGCTGCAAAGTTTTGGAGCAGCAGAACAAGAGCCATTGATTTAGACCCCAACACCCAACTGAAGCTTGTGTTCTTCGCAAATTGCCGAAACCTTTTGAACCCTCCACTTCCCAAAGGTTTCTATGGAAACTGTTTCTTCCCAGTGACGATCACAGCTTCATGTGAGTTTCTTAGAGATGCCACGATCATTGAGGTGGTGAAGGTGATTCAAGAAGCCAAGGGTGAGTTACCTTTGGAGTTCGGGAAGTACTTGAAGGGTGAGTGTGTGAGTGGCGGTGAGGATCCATTCGCACCGCCACTTACATATACCACTCTATTCATTTCAGAGTGGGGGAGGTTGGGATTCAACCACGTAGACTATCGGTGGGGTCCACCAGTCCACGTGGTTCCCATTCAGGGATCCAGCATTATTCCAGTGGGGATTGTGGGGTCCCTGCCTCTCCCGAACAAAGGGATTCGTTTGATGACGTGGTGTGTAAAGGAGGAACATAAACTTCCCTTCCTTGATCACATGCATGGTGCCATGGATCAGGAACCATTATAA 1287 0.4709 MAMSVIRTKRGMVKPAKETPLTTLDLSVMDRLPVLRCNARTLHVFRHGPEATRVIREALSLALVPYYPLAGRLIESKPRCLQIECSGEGVWYVEASADCTLHSVNFFDDVQSIPYDDLLPDHIPENEHVDPLVQMQVTKFGCGGFVIGLMFCHSICDGLGAAQFLNAVGELARGLNKPTIEPAWHRDFFPPQEAEAEAQPNLKLLGPPPMPDYQLQHANIDMPMDQIKQLKSSFEQVTGQTCSAFEIVAAKFWSSRTRAIDLDPNTQLKLVFFANCRNLLNPPLPKGFYGNCFFPVTITASCEFLRDATIIEVVKVIQEAKGELPLEFGKYLKGECVSGGEDPFAPPLTYTTLFISEWGRLGFNHVDYRWGPPVHVVPIQGSSIIPVGIVGSLPLPNKGIRLMTWCVKEEHKLPFLDHMHGAMDQEPL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0472 428 PANTHER ACYL TRANSFERASE 4 1 421 - -
Lja1g0472 428 PANTHER ACYL TRANSFERASE 4 1 421 - -
Lja1g0472 428 Pfam Transferase family 4 379 - -
Lja1g0472 428 Gene3D - 1 198 IPR023213 -
Lja1g0472 428 Gene3D - 199 413 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0472 Lja-Chr1 4226781 4230291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0472 12 411 Monolignol Biosynthesis Gene Families AT5G48930 29.371 8.62e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0472 - - gmx:100783128 673.7