Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0461 ATGGACGATTGTTGTGCTGTTTGCGCCGAGCCCTTGGAATGGGTTGCCTACGGACCCTGTTTGCACCGCGAGGTCTGCTCCACCTGCGTCGCCCGCCTCCGTTTCATTTGCGACGATCGCCGTTGTTGCATCTGCAAGACCGATTGCAACCTCGTCTTCGTCACCAAGGCTCTAGGAGATTATACAAGGATGATTAATGATTTTTCATCCTTGCCGGTTGAGGTAAGGGAGGGCAAGGTTGGATCGTACTGGTATCATGAGGATACAAACACATTTTTCGATGATGTGGACCAATACAAGATGATCAAGGCTATGTGCAGGCTTTCATGCACTGTGTGTGACAAGATGGAGGAGCAACCACAAGATGTTCCAAGGAGACGAGAGAGGTTTAGGAATATAGGGCAGCTGAAGGGTCACTTATTCCACCGTCATAAGTTGCATATGTGCGGTTTGTGTTTGGAGGGAAGGAAGGTATTTATATGTGAGCAAAATCTATATTCTAGAGCACAGTTGAATCAACACATATGCACAGGTGATTCTGAAGTGGATGGAAGTGAGAGTGACAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTCTGCAGAACCCCATTTTATGGGGACAATGAACTGTACACGCACATGTCTACAGAACATTATACTTGTCATATATGTCAAAGACAGCATCCAGGACAGTATGAATACTATAAGAGTTATGATGACCTAGAGATCCACTTCCGTCAAGATCACTTCTTATGTGAGGATGAGGCTTGCCTTGCTAAGAAATTTATTGTTTTTCAATCTGATTCAGAGATGAAGAGACATAATGCTACTGAGCATGGAGGGCGAATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCGACTAGTTTTCGATACAGACATGGTAGTGAACAGGACCAACGCCGTGGAAGAGGTCGTACGTTCCGTCGAGATTTTTCTGAAAATCAACTTTCTATGGCCATTGAAGCCAGTTTGCAGTCAGCTAATGATGAGTATCATATTCCATCAACATCAAGTAATGGACAAATGGCTGCTGCTGATGGGAGTGATGACATTGATTCTATCATCCAACCTTTTGAATCGTTAGCTACAGCAGATTCTGAATCATCTGCAAGGTACCTTCAAGCCTTAGGCCACTCAAAGAATGGAGTTCTAGGAGATTCTTCCTTTCCTCCGCTTTCTGGAACTTCCAGCAATGCTCCGCAAATATCCAAAAATGACTTGGAAGGTTCATCTAGTAACACGATGGCAGCACGTTTGCGTCGGCATGGCAAGAGAAGTGTATCTGTTGTTAATTCTGGTAATGCCTGGTCTGTAGCAGGCCGTGGACCTGTACAACCATTAAGCAATCCTTCACAATCAAAACCGTCAACAAACCTTGGTCTTGGAGTGTCTCGCAATTCTGGTCAGATGAAGACGGGAACTAATAGTGGACCTTCACCCTCTGGTCAGATGAAGACAGGAACTAACAGTGGACCTTCACCCTCAACTTATGCTAGCTCCATTCAGGCTACACAAAGAACTTCTCATAGACAATTACCTGCTGGTTCATTGAGGGACGCACGTGACAATGGTAGAATAGTTCACTCTGCATCTGCTCCAAACCTCATTGAGAATAATCCTGTTGAGGTTTCAATTTCAGATTTCCCTCCAGTTTCTGCTGCACAAGTGAGCAAGTTACCTACAAGCAGTCAGTCTCTGTTGAATGTGGAGAACGTTAAGTCTGCTAACAAGTCATTGGTCGATAAGATTCGCAGTGCTCTTGATTTTAATGAAGAAAGATATACTATATTTAAAGACATATCTGCGCGATATCGTCAAGGCACACTAGATACTGGTACATATGTGGACTGTGTGCAGCAGTTTGGCTTGTCTCATCTTGTACTTGAGTTGGCAAGACTTTGCCCAGATCCTCAGAAGCAGAAAGAACTTGTTGAGGCTTACAACGCAACTTTGCAAACAAATAGTTTTCAAGATAATAACTGGGCTTCTGGCAGCAGTAGCACCCATCGCAAGGACAGTAATGTCGGCAAGAAAGGTAAAGGTAAGACTGTAGATGGTGGGGCAGAGAGACTAGCAGATAGTTTTTTAAGTACTGTGCATCAACTACAGTCGAGTTATGAACCTTCAGAAGAGAAGTTGGAGGTCCTATCAAAGGGCGATTACCGCACTGACAGAGGCAAATCAAAGATCAAGCAGCCGATTGATACTAACTCTGGTAGTCAACCTAAGATGAAGGATGGCGGGCAGGCTAGAACATCAAATGCCAGCTTATCTAATCAAAATAGAGAGGATGGGGGTGGCGGGAACAAGCAACGCAAGAAAAGTTCCAAGTTCCTGAGAGTGCGCCTGGGTGATGGTTCTGCTTCGACCCTTCATGAAAACCAACACACCGAAACAGGTCCTGGAACAACAGACAATTTAGAAGAGAACAGGAATGGCACTGGAGGAGGGCTGCCTGTGAGAGGTGTTTGGCGAACCGGGGGTGTTCACAAGCTCTTCTCCTAA 2535 0.4509 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTDCNLVFVTKALGDYTRMINDFSSLPVEVREGKVGSYWYHEDTNTFFDDVDQYKMIKAMCRLSCTVCDKMEEQPQDVPRRRERFRNIGQLKGHLFHRHKLHMCGLCLEGRKVFICEQNLYSRAQLNQHICTGDSEVDGSESDRGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKSYDDLEIHFRQDHFLCEDEACLAKKFIVFQSDSEMKRHNATEHGGRMSRSKRNAALQIPTSFRYRHGSEQDQRRGRGRTFRRDFSENQLSMAIEASLQSANDEYHIPSTSSNGQMAAADGSDDIDSIIQPFESLATADSESSARYLQALGHSKNGVLGDSSFPPLSGTSSNAPQISKNDLEGSSSNTMAARLRRHGKRSVSVVNSGNAWSVAGRGPVQPLSNPSQSKPSTNLGLGVSRNSGQMKTGTNSGPSPSGQMKTGTNSGPSPSTYASSIQATQRTSHRQLPAGSLRDARDNGRIVHSASAPNLIENNPVEVSISDFPPVSAAQVSKLPTSSQSLLNVENVKSANKSLVDKIRSALDFNEERYTIFKDISARYRQGTLDTGTYVDCVQQFGLSHLVLELARLCPDPQKQKELVEAYNATLQTNSFQDNNWASGSSSTHRKDSNVGKKGKGKTVDGGAERLADSFLSTVHQLQSSYEPSEEKLEVLSKGDYRTDRGKSKIKQPIDTNSGSQPKMKDGGQARTSNASLSNQNREDGGGGNKQRKKSSKFLRVRLGDGSASTLHENQHTETGPGTTDNLEENRNGTGGGLPVRGVWRTGGVHKLFS* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0461 844 MobiDBLite consensus disorder prediction 303 320 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 712 832 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 681 696 - -
Lja1g0461 844 CDD RING-HC_ZNF598 5 46 IPR041888 -
Lja1g0461 844 PANTHER ZINC FINGER PROTEIN 598 1 843 IPR044288 GO:0061630|GO:0072344
Lja1g0461 844 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Lja1g0461 844 MobiDBLite consensus disorder prediction 303 322 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 798 821 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 454 522 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 396 421 - -
Lja1g0461 844 PANTHER EBR1 1 843 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 394 421 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 742 775 - -
Lja1g0461 844 SMART c2h2final6 251 280 IPR013087 -
Lja1g0461 844 SMART c2h2final6 196 219 IPR013087 -
Lja1g0461 844 SMART c2h2final6 108 144 IPR013087 -
Lja1g0461 844 SMART c2h2final6 220 250 IPR013087 -
Lja1g0461 844 MobiDBLite consensus disorder prediction 444 532 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 721 741 - -
Lja1g0461 844 MobiDBLite consensus disorder prediction 667 696 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0461 1 844 C2H2 Transcription Factor Family AT3G62240 52.583 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0461 1 4091772 4096348 Lja1g0461 1 4091772 4096348 ECH