Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0456 ATGGAAGAAACATTTGTACCCCTTGAAGGGATCAAGAATGACCTCAGAGGGAGGTTAATGTGCTACAAGCAGGATTGGATTGGTGGAATCAAAGCAGGCCTAAGGATTTTGGCCCCCACCACATACATATTTTTTGCTTCTGCAATACCTGTCATTTCTTTTGGTGAACAACTAGAAAGAGATACTGATGGTGTTCTAACAGCTGTTCAAACTTTGGCATCCACTTCAGTATGTGGCATCATACACTCAATCATTGGTGGTCAACCTTTACTTATTTTAGGTGTGGCAGAGCCTACAGTGATCATGTACACATTCATGTTCAATTTTGCTAAAGAGAGACCAGAGTTGGGCCGGGAAAAATTTCTGGCATGGACAGGATGGGTATGTGTGTGGACTGCACTGTTGCTATTCTTACTGGCCATCTTAGGAGCTTGCTCCATAATCAACAGGTTTACGCGAATTGCAGGAGAGTTGTTTGGCATGCTTATTGCAATTCTCTTCATGCAGCAAGCTATCAAAGGACTAGTGGATGAGTTTCGCATACCGGAAAGAGAAGATCCAAAATCAATTGAGTTTATACCTTCATGGAGATTTTCTAATGGAATGTTTGCTTTAGTCCTTTCTTTTGGCCTTCTCTTCACTGCATTAAGAAGTAGAAAGGCAAGGTCATGGCGTTATGGTAGTGGTTGGCTTCGCAGCCTAATAGCTGACTATGGTGTGCCTCTTATGGTCCTAGTTTGGACTGGTGTGTCCTACATGCCATCTAAAAGTGTTCCAAATGGTATCCCAAGGCGCCTCTTCAGCCCAAATCCTTGGTCACCGGGTGCATATGAGAATTGGACTGTTATTAAGGATATGATCCATGTTCCTGTTGTCTACATAATTGGAGCATTTATTCCAGCAACCATGATTGCAGTGCTCTATTACTTTGACCACAGTGTGGCATCCCAGCTTGCCCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCACTATGACTTGCTCCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCTTCAAATGGAGTCATACCACAGTCCCCAATGCACACCAAGAGTCTAGCAACTCTAAAACATCAGTTGCTTCGGAACAGACTAGTGGTAACAGCGCGAAAAAGTATTGGAAAGAATGCTAGTTTAGGACAGTTATATGGGAATATGCAAGAAGCCTATCATCAAATGCAGACACCTCTTATTTACCAGGACCCCTCTGCAAGAGCACAGGGACTAAAAGAACTGAAAGAAACAACCATTCAAGCTGCTACCAGCATGGGAAACATGGACGCCCCGATAGACGAGACTATGTTTGATGTTGAGAAAGAAATCGACGACCTGCTACCGGTTGAGGTGAAGGAGCAGCGTGTGAGTAACTTGCTTCAATCAGTGATGGTTGGAGGGTGTGTTGCAGCCATGCCAATCCTCAAGAGGATTCCTACTTCAGTACTTTGGGGCTACTTTGCATTCATGGCCATTGAAAGTTTGCCAGGAAATCAGTTTTGGGAAAGGATCCTGTTACTCTTCACTGCACCAAGCAGAAGATACAAGGTGCTTGAGGATTATCATGCTACTTTTGTGGAAACAGTCCCTTTCAAGACAATAGCAGCATTCACCATTTTCCAAACCGTTTATCTTCTAGGATGTTTTGGACTAACTTGGGTTCCTATCGCGGGGGTCATGTTCCCTTTGTTGATCATGCTCTTAGTTCCAGTAAGACAGTACTTCCTCCCCAAGTTTTTCAAAGGGGCACACCTTCAGGACTTGGATGCAGCAGAGTATGAAGAGCAAACTGCTTTACCATTTAACATTGCCGCGCAATCAGAATTTGGAGGTGGTGCTTCTCATATTGGAGAAAGTGAGATCCTAGATGAAGTTATCACTAGAAGCCGCGGTGAGTTTAGGCACACAAGCAGCCCAAGGATCACAAGCTCCACTCCAACACCAGGAAATGAAACTAAAAGCCATTTGAGCCCGAATCTCTCTTTTAATTCACGCATGGGTGAGTTCACAACTGAGCAAAGTCCTCGTTCTGGTGCAAGAGGTCCTAGTCCAAAGGCCAGAGAAGTGAGATTATCAAGTCTTGGAAGAAGTCCTCTTGATCCTGATTCAAAACAGAAGCAGGACAAAAAATAA 2172 0.4388 MEETFVPLEGIKNDLRGRLMCYKQDWIGGIKAGLRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSVCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGREKFLAWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGMLIAILFMQQAIKGLVDEFRIPEREDPKSIEFIPSWRFSNGMFALVLSFGLLFTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYMPSKSVPNGIPRRLFSPNPWSPGAYENWTVIKDMIHVPVVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVVTARKSIGKNASLGQLYGNMQEAYHQMQTPLIYQDPSARAQGLKELKETTIQAATSMGNMDAPIDETMFDVEKEIDDLLPVEVKEQRVSNLLQSVMVGGCVAAMPILKRIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIAAFTIFQTVYLLGCFGLTWVPIAGVMFPLLIMLLVPVRQYFLPKFFKGAHLQDLDAAEYEEQTALPFNIAAQSEFGGGASHIGESEILDEVITRSRGEFRHTSSPRITSSTPTPGNETKSHLSPNLSFNSRMGEFTTEQSPRSGARGPSPKAREVRLSSLGRSPLDPDSKQKQDKK* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0456 723 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Lja1g0456 723 Pfam HCO3- transporter family 8 179 IPR011531 GO:0006820|GO:0016021
Lja1g0456 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Lja1g0456 723 PANTHER ANION EXCHANGE PROTEIN 1 699 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lja1g0456 723 MobiDBLite consensus disorder prediction 644 723 - -
Lja1g0456 723 MobiDBLite consensus disorder prediction 649 691 - -
Lja1g0456 723 PANTHER BORON TRANSPORTER 2-RELATED 1 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0456 Lja-Chr1 4039935 4044727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0456 1 694 Antiporters AT3G62270 82.471 0.0 1172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0456 K24194 - gmx:100776705 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0456 1 4039935 4044727 Lja1g0456 1 4039935 4044727 ECH