Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0431 ATGCCAACCGATGTATTGAAAATGGTTCAAGGCTTCTTGCTGAAATGGATGCTCATATTATCTTGCCTGGTATTTATAAATACTGGTCAACCCCCTGAAAGTTCACATTTACCCATACCATTCAAGGAGAGGAATGAATGGAAACCTTCGATTTCTGGCTTTGAAGATATTGCTCCTATTCATTCCTCTGCAGCTGCAGTCCCTTCTGCCTTGGCTCAGCCACCTGTGTCTCCTGATGTTTCCAATTGCTGTAAACAAGACATGGTGTTGAAACGAGGCAGCAAGAGTTGCCACTGCGCGTATCCCATAAAGCTAGACCTTCTTCTGTGGAATGTCTCTCAAAATCGTAATTGGAATGTTTTTCTTGATGAATTTGCTACCCAGCTTGGGTTGCAAGATACCCAAATTGAACTGATAAACTTTTACGTACTCAGCTTTTCAACATTAAATATATCGATGGATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAGTGCAGCTTCTGAAATAAACTCTTCACTTTCAATGCATAAGGTTAAACTAGACCCTGGATTAGTAGGTGGATACAAACTTCTCAGTTTAACATGGTTTGAACCTCCGCCTTCTTCTCTAGCTCCTACTTTAGCTGCATCGCCTGTGAATGTTCCTTTGTATCATTTACCTACAGCTACATCATCAAGTTCTTCAGACAGGGGAAGGCATTCAAATCTATATCTTATTCTTGGAATCGCTATTGGCATACTTTTAATTGCTATTGTATCTCTACTTATATTCTGTTTATGTATGCCACTGCCGAAGGAAAATACACCTCCCTTAGAAACTGAAAAGTTAAGGATAGAAAGTACTGTTTCCGCTGTGGGTTCGATTCCCCACCCAACCAGCAGCACACGGTTTATTGCTTATGAGGAACTGAAAGAAGCGACAAACAATTTTGAACCAGCGAGTGTACTTGGAGAAGGAGGGTTTGGTAAAGTTTTTAAAGGTGTCTTACATGATGGTACTTGTGTAGCAATTAAGAGGCTTACAAATGGAGGACAACAGGGTGACAAAGAATTTTTGGTTGAGGTTGAAATGCTTAGTCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGGTACTATAGTAATCGTGAGTCATCACAAAATCTACTTTGCTATGAACTTGTCCCTAATGGGAGTTTGGAAGCTTGGCTTCATGGTCCCATGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCTCTTGATGCTGCAAGAGGACTTTCGTACCTGCATGAGGACTCACAGCCTTGTGTAATACACAGAGATTTCAAGGCATCCAACATACTGCTCGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGAACTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACCGGACACCTACTTGTTAAAAGTGACGTCTATAGTTATGGGGTTGTCTTGCTAGAACTGCTTACGGGAAGGAAACCCGTGGATATGTCACAGCCAGCTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGAACGGTTAGAAGAGATTCCCGATCCAAGACTTGGGGGAAAGTATCCAAATGAAGATTTTGTGCGTGTGTGCACTATTGCTGCAGCCTGTGTTTCTCCTGAAGCAAACCAACGTCCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGTGTCACAGAATACCATGATTCTGTGTTACCGTCCACCAATGCTCGATCCAACCTGAGACAGTCCTCTAGCACTTTTGAGTTTGATGGAACATCTTCTATGTTCTCTTCAGGTCCTTACTCTGGTTTAAGTGCTGCCTTTGACAATGATAACTTTTCTAGGACAGTGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 1974 0.424 MPTDVLKMVQGFLLKWMLILSCLVFINTGQPPESSHLPIPFKERNEWKPSISGFEDIAPIHSSAAAVPSALAQPPVSPDVSNCCKQDMVLKRGSKSCHCAYPIKLDLLLWNVSQNRNWNVFLDEFATQLGLQDTQIELINFYVLSFSTLNISMDITPHKGISFSASAASEINSSLSMHKVKLDPGLVGGYKLLSLTWFEPPPSSLAPTLAASPVNVPLYHLPTATSSSSSDRGRHSNLYLILGIAIGILLIAIVSLLIFCLCMPLPKENTPPLETEKLRIESTVSAVGSIPHPTSSTRFIAYEELKEATNNFEPASVLGEGGFGKVFKGVLHDGTCVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRESSQNLLCYELVPNGSLEAWLHGPMGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKERLEEIPDPRLGGKYPNEDFVRVCTIAAACVSPEANQRPTMGEVVQSLKMVQRVTEYHDSVLPSTNARSNLRQSSSTFEFDGTSSMFSSGPYSGLSAAFDNDNFSRTVVFSEDLHEGR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0431 657 Gene3D Phosphorylase Kinase; domain 1 276 389 - -
Lja1g0431 657 CDD STKc_IRAK 318 588 - -
Lja1g0431 657 Gene3D Transferase(Phosphotransferase) domain 1 390 607 - -
Lja1g0431 657 PANTHER OS01G0750732 PROTEIN 26 657 - -
Lja1g0431 657 ProSiteProfiles Protein kinase domain profile. 312 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0431 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Lja1g0431 657 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Lja1g0431 657 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 26 657 - -
Lja1g0431 657 SUPERFAMILY Protein kinase-like (PK-like) 288 589 IPR011009 -
Lja1g0431 657 Pfam Protein kinase domain 315 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0431 Lja-Chr1 3801583 3806543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0431 25 657 Receptor kinase-like Gene Family AT4G02010 71.496 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lja1g0431 Pkinase 6.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0431 - - gmx:100793528 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0431 1 3801583 3806543 Lja1g0431 1 3801583 3806543 ECH
Lja1g0431 1 3801583 3806543 Lja5g1238 5 12413538 12419160 PCT