Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0429 ATGGAAAATAATGCCAGCCCCCAACTTGAGTCAGAAGCATCTTTGGAGCTCAAATTAGAAACTCAAGCATCCAAGAAACAGAAAATGGTTGAGAAAACAGTTGTTACTGTGAAGATAGGAGAGAATGTTAGCAAGGTGAAGAAGAATGAAGGGCTCCCTTCTGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATCAAAGGTTCTCCATATCCAAGGGGATATTATAAGTGCAGCACATCCAAAGGGTGCTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATTCTTCCATGCTCATCATCACCTACACCTCTACACATAACCATCCAGGTCCCACCACAAATTTACCCCAACAACAACAAAAAGAATCTGAATCAGAAACCACTGAAAATCTCCCAGGTACCTTGAAGGAGGAAGAAGAACAAGAACAGGTAGAAAATTTCCCAGCTACCCTGAAGGAGGAAGAAGAACAAGAACAGATAGAAAATCTCCCAGCTACCTTGAAGGAGGAAGAAGAGCAAGAACAGATAGAAGTAGAAGAGGAAGAAGTGAATACTAATAGCAGTAGCACCATGACTAGTAGTGATCAAGGTGCAAATGAAGAAATTTTTCATTACTTGCAATCTCCAATTATAGACCAAGAAGAAGATCCTTTCAAACTGGAAAAAAACAATGACAGAATAGATTTACTCTTAGAGGCAGAGCCTCTCTGTTATGCAGCACAGGTGAGGAACTTGTCAACATCCAAAACAGAAGAGCTTGAGATTTTCGATGAGCTTGAGGAGCTACCCATGTTTTCATCTTTTCTACACTTCACGAGGAGCATTCTCTCCGATGAAAGGATTCCTGTTGCTCCTTCTTGA 870 0.4103 MENNASPQLESEASLELKLETQASKKQKMVEKTVVTVKIGENVSKVKKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDSSMLIITYTSTHNHPGPTTNLPQQQQKESESETTENLPGTLKEEEEQEQVENFPATLKEEEEQEQIENLPATLKEEEEQEQIEVEEEEVNTNSSSTMTSSDQGANEEIFHYLQSPIIDQEEDPFKLEKNNDRIDLLLEAEPLCYAAQVRNLSTSKTEELEIFDELEELPMFSSFLHFTRSILSDERIPVAPS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0429 289 SUPERFAMILY WRKY DNA-binding domain 51 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g0429 289 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 274 IPR044810 GO:0003700
Lja1g0429 289 Coils Coil 156 176 - -
Lja1g0429 289 MobiDBLite consensus disorder prediction 107 146 - -
Lja1g0429 289 ProSiteProfiles WRKY domain profile. 48 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g0429 289 Gene3D WRKY domain 38 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g0429 289 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g0429 289 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 14 274 - -
Lja1g0429 289 MobiDBLite consensus disorder prediction 107 133 - -
Lja1g0429 289 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0429 Lja-Chr1 3791706 3793776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0429 25 115 WRKY Transcription Factor Family AT2G34830 63.736 1.87e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja1g0429 WRKY 4.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0429 - - lja:Lj1g3v4849490.1 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0429 1 3791706 3793776 Lja1g0429 1 3791706 3793776 ECH