Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0422 ATGGCTTCGATTATGAGTTCGGGATCGGCATCGGAAGGCGGAGGAGGAGCAGATCTGCATGTTGACAACGAGAGGAAGAGGAAGAGGATTCTGTCCAACCGCGAATCCGCTCGGCGATCACGGATGCGGAAACAGAAGCAGCTGCAGGATCTGACTACCGAGATCACCAAACTGCAGGTGGGGAATCGGAAGCTGGTGGAGGACATAGCGGCCAAGGAGAAAGCGTTTGCTGAGGTCGATGCTGCGAATGCCGTACTCAGGACACAGACTATGGAACTGGCTGATCGGTTGCGATTCCTCAACTCCATTCTCGAGATTGCTCAAGTTAGCGGATACTCTGTTGAAATTCCCCAGATTCCTGATCCTCTTCTCACACCATGGCAGGTTCCCCGTCCTACTCAACCCATCATGGCCTCTGCAAACGTGTTCCTGCATTGA 438 0.5342 MASIMSSGSASEGGGGADLHVDNERKRKRILSNRESARRSRMRKQKQLQDLTTEITKLQVGNRKLVEDIAAKEKAFAEVDAANAVLRTQTMELADRLRFLNSILEIAQVSGYSVEIPQIPDPLLTPWQVPRPTQPIMASANVFLH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0422 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Lja1g0422 145 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Lja1g0422 145 SUPERFAMILY Leucine zipper domain 25 72 IPR046347 GO:0003700|GO:0006355
Lja1g0422 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Lja1g0422 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 143 - -
Lja1g0422 145 MobiDBLite consensus disorder prediction 1 27 - -
Lja1g0422 145 Gene3D - 23 76 - -
Lja1g0422 145 Coils Coil 34 54 - -
Lja1g0422 145 CDD bZIP_plant_GBF1 26 77 IPR045314 GO:0003700|GO:0006355
Lja1g0422 145 Pfam bZIP transcription factor 25 75 IPR004827 GO:0003700|GO:0006355
Lja1g0422 145 PANTHER BZIP TRANSCRIPTION FACTOR 53 6 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0422 Lja-Chr1 3721675 3722601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0422 21 143 bZIP Transcription Factor Family AT3G62420 54.839 1.00e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g0422 bZIP_1 1.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0422 K25786 - gmx:780550 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0422 1 3721675 3722601 Lja1g0422 1 3721675 3722601 ECH
Lja1g0422 1 3721675 3722601 Lja5g1229 5 12366425 12367480 ECH
Lja1g0422 1 3721675 3722601 Lja5g1229 5 12366425 12367480 PCT