Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g0401 | ATGGCAGCAGAGGCGGCAACATTGTCGTTTTCAGTGGCTTCAGTCATGGAGGATGTCCTTCAACAACATGGTCATCGCCTCAAGGATCTTGATTTGGAATCTAGGAAAGCTCAAGAAGCTGCATCCAGAAGATATGAGGCAGCAGGGTGGTTGAGAAGAATGGTTGGCGTTGTCGGAGCTAAAGACTTACCAGCTGAGCCCTCTGAGGAGGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATCCTATGTAATGTTATTAATAAGGTTCAATCCGGGGCTGTACCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCAATGATCCTTGATGGGGCACCATTATCCGCATATCAGTATTTTGAAAACGTGAGGAATTTCCTCGTGGCTGTCCAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTTGAACAAGGAGGAAAATCATCCAGGATTGTGAACTGTGTCTTGGCACTTAAATCCTATAGTGAATGGAAACAGAACGGGGCAAATGGTGTGTGGAAATTTGGTGGAGCTCTCAAGCCCACCATCTCTGCAAAAACTTTAGTGAGAAAAAACTCAGAACCATTTACTAATTCCTTGGCAAGGACTTCATCAATCAATGAGAAATCTCTTGCTACTCTTAACTCTGACATGGAGTCTAATAAAATGTCTGGTTCCCATTCCTTGAGTATGCTTGTTCGTTCAATTTTATTAGATAAGAAGCCAGAAGAAGTTCCAATGCTGGTTGAATCTGTCTTGAATAAGGTTGTAGAGGAATTTGAGCAGCGTATCGCTAGCCAAGGTGAACAGATGAAAACAGCTTCAAGAGATTCTACTTCTGAAAGCAACGGGTCTGTTTCAAAGTTTGTTATGGAAGACAAAAAGGTAGAGAACAAAATTCATACGGTAACAAGAAAAGAGGATTGTATTCGTAAAAATTGTGTGGCTGCTGGGGAATTGCAGAGCCAACTTCTGAAGCAGCAAATGCTCTTTGACCAACAGCAAAGAGATATTCAAGAGCTAAAGCATATTCTGCACACCACTAAAGGGGGTATGCAGCTCATGCAAGTGAAATTTCATGAGGAGTTTTCCAATCTTGGTATGCACATCCATGGCTTAGCTCATGCTGCTTCTGGCTATCACAAAGTTCTTGAAGAAAACCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTCGGGTGTACTGTCGAGTAAGGCCTTTCTTTCCCGGACAAACAAGCCATTTGAGCTCAGTAGAAAATATAGAAGATGGAACTCTTACAGTTAATATCCCTTCAAAGAATGGGAAGGGGCACAGGTCCTTCAATTTCAACAAAGTATTTGGACCATCTGCAACCCAAGCTGAGGTCTTCTTGGATATGCAGCCACTTATTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTCACACCATGACTGGACCAAAGGAGATCACAGAGAAAACCCAAGGAGTAAATTACAGGGCTTTAAGCGATTTATTTCATATAGCAGATCAAAGAAAGGACACTTTCCAATATGATGTTTCTGTACAAATGATGGAGATATATAATGAGCAAGTGAGGGATCTGCTGGTCACTGATGGAACAAACAAAAGATATCCTTTTGCCAATTATTTGATTGTCTTTGGGAAAAGTAGTTCTCACAAAGGACTCAGTGTGCCAAATGCTAGCCTTGTCCCTGTGTCATCGACTGTTGATGTTATTGAACTAATGAACCTTGGGCAACGGAACCGTGCAGTTGGAGCAACAGCTCTTAACGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATATTCAAGGAAGAGATTTGACATCTGGAGCTATCCTTCGTGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTAGATAAATCTGAAGCCACAGGAGACAGACTAAAAGAGGCACAGCATATTAACAAGTCACTTTCAGCTTTGGGGGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACATGTTCCTTATAGAAATAGTAAACTCACACAGTTGCTCCAAGATTCACTTGGAGGAAAGGCCAAGACACTAATGTTTGTTCACATAAGTCCAGAGAGTGATGCTATTGGAGAAACACTAAGTACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTCGGTGCTGCCCGAGTAAACAAAGATAGTACTGCAGATGTTAAAGAGCTCAAAGAACAGATTGCAAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGAAGGGGAATCAGAATATTCTTTATCCGGAAGCTCAGACAAGTATAGGACAAAGGCTAGCGAGCTATCACCTTATGATGTAAACCAGCGAACTGCAGATACTGGGGATCAGCCTGGATGCCGGCGACCAATGGTTGAAGTTGGCAACATCGAGCTTCAGAGTAATACCAAGTTGAGGCACAAAACTCAGGGCTTTGATTTTGATGAGATATCAGCAAATTCACCGCCCTGGCCCCCAGTGAATGTTCAGAGCTATGGGGAGGATGACAGAGAAACAGGTTATGGAGATTGGGTGGATAAGGTCATGGTAAACAAGCAAGACATGAACAAAACTGAGAACCTCTTGGGATGTTGGCAATCAACCAATGGGAACTTGTCACAGGCATTTTATCAGCAATATCTCCAAGATTCTTCCAATGACATGGATGAACTTGATGCTGCAACCAGTGATTCCTCGGAACCTGACTTGCTTTGGCAATTTAATCACTCCAAACTTAACAGTGTGACTAATGGGATGGGATCAAAGATAATATCTGTCTCAAAGGCACCAAAAACCCCAGAACTGAACAAGAATGTTGTTCATTCTTCTCTTGGTGCTTCTGCTTCACCTTCGCTGAGACGATCAAATAGTGCCTCACATCGAACAGGAAGGCATCCAGCTTCAGTTGACGCGAAACGGAAAACTGGGAGTCGAAAGTAA | 2997 | 0.4264 | MAAEAATLSFSVASVMEDVLQQHGHRLKDLDLESRKAQEAASRRYEAAGWLRRMVGVVGAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSAMILDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKQNGANGVWKFGGALKPTISAKTLVRKNSEPFTNSLARTSSINEKSLATLNSDMESNKMSGSHSLSMLVRSILLDKKPEEVPMLVESVLNKVVEEFEQRIASQGEQMKTASRDSTSESNGSVSKFVMEDKKVENKIHTVTRKEDCIRKNCVAAGELQSQLLKQQMLFDQQQRDIQELKHILHTTKGGMQLMQVKFHEEFSNLGMHIHGLAHAASGYHKVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQTSHLSSVENIEDGTLTVNIPSKNGKGHRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMTGPKEITEKTQGVNYRALSDLFHIADQRKDTFQYDVSVQMMEIYNEQVRDLLVTDGTNKRYPFANYLIVFGKSSSHKGLSVPNASLVPVSSTVDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHIQGRDLTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGKAKTLMFVHISPESDAIGETLSTLKFAERVATVELGAARVNKDSTADVKELKEQIASLKAALARKEEGESEYSLSGSSDKYRTKASELSPYDVNQRTADTGDQPGCRRPMVEVGNIELQSNTKLRHKTQGFDFDEISANSPPWPPVNVQSYGEDDRETGYGDWVDKVMVNKQDMNKTENLLGCWQSTNGNLSQAFYQQYLQDSSNDMDELDAATSDSSEPDLLWQFNHSKLNSVTNGMGSKIISVSKAPKTPELNKNVVHSSLGASASPSLRRSNSASHRTGRHPASVDAKRKTGSRK* | 999 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g0401 | 998 | MobiDBLite | consensus disorder prediction | 955 | 982 | - | - | |
Lja1g0401 | 998 | Pfam | Kinesin motor domain | 406 | 732 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja1g0401 | 998 | MobiDBLite | consensus disorder prediction | 266 | 287 | - | - | |
Lja1g0401 | 998 | PRINTS | Kinesin heavy chain signature | 473 | 494 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja1g0401 | 998 | PRINTS | Kinesin heavy chain signature | 603 | 620 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja1g0401 | 998 | PRINTS | Kinesin heavy chain signature | 634 | 652 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja1g0401 | 998 | PRINTS | Kinesin heavy chain signature | 683 | 704 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja1g0401 | 998 | MobiDBLite | consensus disorder prediction | 953 | 998 | - | - | |
Lja1g0401 | 998 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 400 | 767 | IPR027417 | - | |
Lja1g0401 | 998 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 5 | 995 | - | - | |
Lja1g0401 | 998 | CDD | KISc_C_terminal | 398 | 735 | - | - | |
Lja1g0401 | 998 | SMART | ch_5 | 43 | 161 | IPR001715 | GO:0005515 | |
Lja1g0401 | 998 | MobiDBLite | consensus disorder prediction | 265 | 287 | - | - | |
Lja1g0401 | 998 | MobiDBLite | consensus disorder prediction | 984 | 998 | - | - | |
Lja1g0401 | 998 | Coils | Coil | 257 | 277 | - | - | |
Lja1g0401 | 998 | ProSiteProfiles | Kinesin motor domain profile. | 400 | 733 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja1g0401 | 998 | ProSiteProfiles | Calponin homology (CH) domain profile. | 41 | 163 | IPR001715 | GO:0005515 | |
Lja1g0401 | 998 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 5 | 995 | - | - | |
Lja1g0401 | 998 | SMART | kinesin_4 | 398 | 741 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja1g0401 | 998 | Pfam | Calponin homology (CH) domain | 42 | 163 | IPR001715 | GO:0005515 | |
Lja1g0401 | 998 | SUPERFAMILY | Calponin-homology domain, CH-domain | 41 | 173 | IPR036872 | - | |
Lja1g0401 | 998 | Gene3D | Kinesin motor domain | 395 | 775 | IPR036961 | - | |
Lja1g0401 | 998 | Gene3D | - | 28 | 189 | IPR036872 | - | |
Lja1g0401 | 998 | Coils | Coil | 741 | 768 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g0401 | Lja-Chr1 | 3540942 | 3546547 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g0401 | 388 | 782 | Calmodulin-binding Proteins | AT5G65930 | 40.000 | 2.55e-75 | 269 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g0401 | K10406 | - | gmx:100815713 | 1595.48 |