Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0377 ATGACACACCTCATGTTACTGCTAATTACACTGCTCCTTCCACTCCTTGCAAACACTGGCCAAAATCAAATGGTATTTGCAAAAGGGAAGAATAACAACAGCAACGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAAACCTCTGTATCCACACGCTATCACATTTCTCTAACACTGCAGGAACAAGCCCCAGCAAATGGGCACGTGCAGGTGTATCGGTAACAATAACCGAGGTTAAGAATGTTCAGGCATACCTCACAAAACTGAAGAAGAACAAGCGTATGATGAAAGGAAGAAACAGAGCTGCTCTGTCAGATTGTGTTGAGTGTTTTGCAGATGCACTTGATGAGCTTCACAGATCGCTCGGTGTTCTTAGGAGGCTGAGCAAGAAGACATTCAGCACCCAAATGGGGGATCTGAACACATGGATCAGTGCAGCACTCACTGATGAAGACACTTGCATAGATGGTTTTGAAGGGAAAACAGAGAGGCAAATCAAATTGCTGCAGAACAGGGTTCAGAATGTGTCTTACATAACAAGTAATGCTCTGGCTCTTGTTAACAAACTGGCCACTACAGGATTGGGAAGCATCACTGATCCATAA 606 0.4406 MTHLMLLLITLLLPLLANTGQNQMVFAKGKNNNSNVREACSVTRYQNLCIHTLSHFSNTAGTSPSKWARAGVSVTITEVKNVQAYLTKLKKNKRMMKGRNRAALSDCVECFADALDELHRSLGVLRRLSKKTFSTQMGDLNTWISAALTDEDTCIDGFEGKTERQIKLLQNRVQNVSYITSNALALVNKLATTGLGSITDP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0377 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 192 IPR035513 -
Lja1g0377 201 SMART PMEI_2 31 186 IPR006501 GO:0004857
Lja1g0377 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 190 IPR035513 -
Lja1g0377 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 185 - -
Lja1g0377 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 190 IPR006501 GO:0004857
Lja1g0377 201 Pfam Plant invertase/pectin methylesterase inhibitor 35 186 IPR006501 GO:0004857
Lja1g0377 201 CDD PMEI-like_3 39 192 - -
Lja1g0377 201 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 19 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0377 Lja-Chr1 3304340 3305241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0377 36 198 Carbohydrate Esterase AT3G14310 34.731 2.37e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0377 - - gmx:100791264 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0377 1 3304340 3305241 Lja1g0377 1 3304340 3305241 ECH