Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0351 ATGATGAAGAGGAAAACCCAGAACGGGATCAGGAAGAATGAGAGAAGGAAGATGAAAGGGACACTCAGCACCAAGCACTTGCAGCTTCAGCTCAATCAAATCTCACTCTTCCCCATTCTCCCAACATCTTCTACTACCTCTTCCGCCTTCCACAACCTTCTCGATTCCGAACCCCACGCCGGCGCCGACCCTTCCGATGACAGAGATTTCATTCTCAGCCAGGATTTCTTCTGCACTCCGGATTACATTACCCCTGATAATCAGCATATTTTGAATGGATTGGATTTCAATAAGGGAAATACCCCTTGCCCCAAATCGCCAGAGAAGCTCAATACAACAAAAAGTAAGAGATGCCGATTAGATGCTATCTCGGTAAACCCTCTCAGTCCTACCTTTTCTAATGACCATCAAATTGTGGAGCTTGGAAAGGATTCTGTTGTAGAGGAAGTAGCTGTTGAGAAAACAGTTGAAGATGGTAAACCAAGGGCTCAAAATTATGTTTCACATTCTGCAGTTGCATTGCGATGTAGGGCTATGCCTCCTCCTTGCATCAGAAATCCCTATTTGAAAGATGTTTCTAAAATGGAGACTGATCCCTTTGGAAACCAAAGATCAAAATGTGCAGGTCTCTTCCCTGGCTTTGGAGGCGGTGATGGGCTTTCACGCTATCGTACTGACTTTCATGAGATTGAGCTAATTGGTAGAGGGAACTTTAGTACTGTTTTTAAAGCATTGAAGCGAATAGATGGTTGCTTGTATGCTGTGAAACACAGCACCAGACAGTTACACCAGGAAACAGAAAGGAGAAAAGCATTAATGGAAGTTCAAGCTTTGGCAGCCATGGGGTCTCATGAGAACATTGTGGGATATTATTCTTCATGGTTTGAAAATGAGCATCTGTACATTCAGATGGAGCTATGTGATCACAGCTTATCCATAAACAAATGCTCTGCATTGTTAACAGAAGGACAAGTCTTAGACGCTTTATATCAGGTTGCAAATGCACTGCGATTTATACACGAGAAGGGGATAGCTCATCTAGATGTTAAACCAGATAATATCTATATCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACCCTTCTTGATACTAGCCTACCAATTGAGGAGGGCGATGCGCGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGATCACCTGGACAAGGTTGATATCTTCTCCTTGGGAGCTTCTATTTATGAACTCATTCGCAGATTGCCTTTGCCAGACTCAGGGTGCAATTTTTTAAATCTTAAAGGGGGCAAGTTGCCACTCCTGCCTGGTCATTCGTTGCAACTTCAAAACTTGCTCAAGGTAATGATGGACCCCGATCCTGTGAAGAGGCCTTCTGCTAGAGAGCTAGTAGAGAACCCAATTTTTGGCAGGGCCTTAAGAACAGCAAAGAATTGA 1443 0.4317 MMKRKTQNGIRKNERRKMKGTLSTKHLQLQLNQISLFPILPTSSTTSSAFHNLLDSEPHAGADPSDDRDFILSQDFFCTPDYITPDNQHILNGLDFNKGNTPCPKSPEKLNTTKSKRCRLDAISVNPLSPTFSNDHQIVELGKDSVVEEVAVEKTVEDGKPRAQNYVSHSAVALRCRAMPPPCIRNPYLKDVSKMETDPFGNQRSKCAGLFPGFGGGDGLSRYRTDFHEIELIGRGNFSTVFKALKRIDGCLYAVKHSTRQLHQETERRKALMEVQALAAMGSHENIVGYYSSWFENEHLYIQMELCDHSLSINKCSALLTEGQVLDALYQVANALRFIHEKGIAHLDVKPDNIYIKNGVYKLGDFGCATLLDTSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIYELIRRLPLPDSGCNFLNLKGGKLPLLPGHSLQLQNLLKVMMDPDPVKRPSARELVENPIFGRALRTAKN* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0351 480 Pfam Protein kinase domain 227 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0351 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Lja1g0351 480 ProSiteProfiles Protein kinase domain profile. 227 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0351 480 ProSitePatterns Protein kinases ATP-binding region signature. 233 256 IPR017441 GO:0005524
Lja1g0351 480 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g0351 480 PANTHER BNAA08G27310D PROTEIN 398 473 - -
Lja1g0351 480 PANTHER BNAA08G27310D PROTEIN 18 385 - -
Lja1g0351 480 SMART serkin_6 227 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0351 480 SUPERFAMILY Protein kinase-like (PK-like) 220 471 IPR011009 -
Lja1g0351 480 Gene3D Transferase(Phosphotransferase) domain 1 306 475 - -
Lja1g0351 480 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 398 473 - -
Lja1g0351 480 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 18 385 - -
Lja1g0351 480 Gene3D Phosphorylase Kinase; domain 1 218 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0351 Lja-Chr1 3083027 3086738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0351 1 473 Core Cell Cycle Gene Families AT1G02970 61.145 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Lja1g0351 Pkinase 7.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0351 K06632 - gmx:547742 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0351 1 3083027 3086738 Lja1g0351 1 3083027 3086738 ECH