Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0288 ATGCTCACTGAAAAGTTCAATCAATTCGTCATTCACTGCAACAATTCCAATCCATCCTCAGACAATGCATCACTGCAATTGAATGAGCTCACTGACAACACGGATGAGAATAGTATGTCGAACGAGATCCATGAAATTTCTCCTGATCAAGGTCACACACTCCCAATTTTGAAGAAAATTCTTGACTTGAGTACTGAAGTTCAGAATTTGAAGAAACAACATGCAGCCCTTTCTGATCAAGTGAAACTAGCAACTGAATCATTTCCTGGCCTAGAGGTTATCAAGTCTGTTAAGCTTCTGGAGTCAGAAAATTATCTTTTGAAAAGAAAGTGCCTGGAGGAGTCTTTGGAGCGTAAGCGCCTTTACAATGAGGTTATTGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGGCCATTGAATCAAAGTGAAGTTGCAAATGGATCAGCGGTATCTGTTGCCAATTTTGAGTCATCTCCTGAGGAGCTACAAGTCATTTGCTCTGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTCAGGCCTGAAGATAACCAAGAGGCTGTTTTTGCGCAAACAAAGCCTGTTGTTACATCAGTGTTAGACGGGTTTAATGTTTGCATTTTCGCATATGGCCAAACTGGTACTGGCAAGACTTTTACTATGGAGGGAACACCAGAGCACAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGGATATCTAAAGAGAGACAAGGAATGAAATATGAATTGCTTGTTAGCATGTTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGCAGAAAATGTTTCTGAACCTTCTAAGAAGTTGGAAATAAAGCAAGCTGCTGATGGAACCCAAGATGTCCCAGGAATTGTTGAAGCTCATGTTTATGGAACAGAAGATGTTTGGGAAATGCTGAAGTCTGGAAACCGAGTCAGATCTGTTGGATCCACCGGTGCAAATGAACTTAGCAGTCGTTCTCATTGTTTGTTGCGATTAACTGTAATGGGGCATGATCTAATCAATGGCCAGAGAACAAGGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTGGGAAAGACTGAAGCTGAAGGAGAAAGGCTAAAGGAATCTCAATTCATAAATAAGTCTCTGTCAGCACTTGGTGATGTTATTTCAGCACTTGCGTCCAAATCAGCACACATACCTTACAGGAACTCAAAGCTCACTCATCTACTTCAGAGCTCTTTAGGAGGAGATTGCAAAACTCTAATGTTTGTCCAGATAAGTCCAAGTACAGCAGACTTAACAGAGACCCTTTGTTCACTGAATTTTGCCACCCGTGTTCGAGGAATTGAGTGTGGTCCAGCTCGCAAGCAAGCAGACCTCACTGAGGTTAAGTGCAAGCAAATGGCAGAAAAGCTCAAACAGGATGAGAAGGAAACTAAGAAATTGCAAGATAACTTGCAGAACATGCAAATGAGACTAGCTACAAGAGAATTCATGTACCGAAATCTTCAAGAAAAGGTTCGGGACCTTGAGAACCAGATTGCAGAGGAGAGAAAAACCAGACTAAAGCAAGAAAGCAGATCACTTGCTGCTGTTTCAGCTCAACCTTCAACGATGTCATCGGCAAAACCCACAGCAGCTGAGAAAGCCACAAAGAAGCCACCACTGAATCCTTCTAAAAGACCACCGTTGAGAAGAATTACTAATTTCTTGCCTCCACCATCTGAGAGAAAGCCCTCCTGTAGCTCTTCCATGGATAGAAAGGAAAATATTGCAAGAACGACCTCAATGAGGACAAGTACAGAAGTCATAACGAAACCAAGAAGAAGGGTTTCCATCGCTGAGAGACCACCACCAGCACCAGCACCAGCACCAGCACCATCCAAAGTCCTTCTTCAGCCTAGAAGGCGAATTTCCATAGCTACACTCCATTCTGCCACAACTTCTGACGTGGCAAGTCCTCTCCGTTCCTCTGCCTCTCAGGCCATTGGTGGAAGTGGCGTTCAGCAATCAATGATAAGGAACCAGAGGAAGCCTCGGTATTCAAGCTTGTTTGCCCCAGCGCCAGCATCAGTTGAGACCTCGCCGACTTTGATGAGGAACAGCAGTAAGTTTGCCGGCAGTCCAACGCAGGCAGATTCCCAGGTGGCGAGGCATCCAACTGTCCTTGCACTGCAGCGCAAATATTTAGTATGGAGTCCTCTCAAGCTGAGAGGCCTGAAAAATAGCAGAAAGACATCACTCTTGCCATCTCGGCCTTCCACTGAAATGCAATGA 2292 0.4385 MLTEKFNQFVIHCNNSNPSSDNASLQLNELTDNTDENSMSNEIHEISPDQGHTLPILKKILDLSTEVQNLKKQHAALSDQVKLATESFPGLEVIKSVKLLESENYLLKRKCLEESLERKRLYNEVIELKGNIRVFCRCRPLNQSEVANGSAVSVANFESSPEELQVICSDSSKKQFKFDHVFRPEDNQEAVFAQTKPVVTSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRISKERQGMKYELLVSMLEVYNEKIRDLLAENVSEPSKKLEIKQAADGTQDVPGIVEAHVYGTEDVWEMLKSGNRVRSVGSTGANELSSRSHCLLRLTVMGHDLINGQRTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHLLQSSLGGDCKTLMFVQISPSTADLTETLCSLNFATRVRGIECGPARKQADLTEVKCKQMAEKLKQDEKETKKLQDNLQNMQMRLATREFMYRNLQEKVRDLENQIAEERKTRLKQESRSLAAVSAQPSTMSSAKPTAAEKATKKPPLNPSKRPPLRRITNFLPPPSERKPSCSSSMDRKENIARTTSMRTSTEVITKPRRRVSIAERPPPAPAPAPAPSKVLLQPRRRISIATLHSATTSDVASPLRSSASQAIGGSGVQQSMIRNQRKPRYSSLFAPAPASVETSPTLMRNSSKFAGSPTQADSQVARHPTVLALQRKYLVWSPLKLRGLKNSRKTSLLPSRPSTEMQ* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0288 763 MobiDBLite consensus disorder prediction 531 550 - -
Lja1g0288 763 Coils Coil 60 87 - -
Lja1g0288 763 SMART kinesin_4 129 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0288 763 Pfam Kinesin motor domain 137 454 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0288 763 PANTHER KINESIN-RELATED 69 755 IPR027640 GO:0003777|GO:0007018
Lja1g0288 763 CDD KISc_C_terminal 129 456 - -
Lja1g0288 763 Gene3D Kinesin motor domain 126 497 IPR036961 -
Lja1g0288 763 PRINTS Kinesin heavy chain signature 404 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0288 763 PRINTS Kinesin heavy chain signature 205 226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0288 763 PRINTS Kinesin heavy chain signature 355 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0288 763 PRINTS Kinesin heavy chain signature 324 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0288 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 489 IPR027417 -
Lja1g0288 763 ProSitePatterns Kinesin motor domain signature. 354 365 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja1g0288 763 PANTHER KINESIN-LIKE PROTEIN KIN-14S 69 755 - -
Lja1g0288 763 ProSiteProfiles Kinesin motor domain profile. 131 454 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0288 763 MobiDBLite consensus disorder prediction 693 718 - -
Lja1g0288 763 MobiDBLite consensus disorder prediction 525 638 - -
Lja1g0288 763 MobiDBLite consensus disorder prediction 650 676 - -
Lja1g0288 763 MobiDBLite consensus disorder prediction 580 607 - -
Lja1g0288 763 Coils Coil 463 532 - -
Lja1g0288 763 MobiDBLite consensus disorder prediction 619 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0288 Lja-Chr1 2394913 2398960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0288 113 479 Calmodulin-binding Proteins AT5G65930 42.973 1.49e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0288 K10406 - gmx:100788477 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0288 1 2394913 2398960 Lja1g0288 1 2394913 2398960 ECH