Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0236 ATGGCAAAGGTGGATCTGTCCAGGGTTACTCTCCGGCCATTTAAGCTAACTGATGTTGATGATTTTTTGTTATGGGCAGGGGATGATCAAGTGACTAGAAATCTACGGTGGAAGACTTGTGGTTCCAGGGAAGAAGCTTTCTTGTTCATCAGAGATGTGTGCATCCCTCACCCTTGGCGCCGGTCAATCTGCGTGGATGATCGTTCTATCGGCTTTGTTTCAGTGTACCAGTGGCCTGGTGATGAGAGGTGCAAGGCAGACATAGGATATGCCATAGCTAGCAACTACTGGGGACAAGGGATAGCCACTCAAGCACTCAAAATTGTTGTGCCTCAAGTCTTTATGGATTTTCCCAATTTGCTGAGGTTGCAGGCTTTTACTGATGTAGAGAACAAGGCTTCTCAGAGGGTCTTGGAGAAAGCTGGGTTTCTTAGGGAGGGTGTTCTCAGAAAATATACTTATATCAAGGGAGATATTAAGGATTTGGTTGTGTTTAGCTTTTTGTCCACGGATGAATTTCCTTCTGTTGATTGA 534 0.4513 MAKVDLSRVTLRPFKLTDVDDFLLWAGDDQVTRNLRWKTCGSREEAFLFIRDVCIPHPWRRSICVDDRSIGFVSVYQWPGDERCKADIGYAIASNYWGQGIATQALKIVVPQVFMDFPNLLRLQAFTDVENKASQRVLEKAGFLREGVLRKYTYIKGDIKDLVVFSFLSTDEFPSVD* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0236 177 Pfam Acetyltransferase (GNAT) domain 8 143 IPR000182 GO:0016407
Lja1g0236 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 174 - -
Lja1g0236 177 Gene3D - 3 173 - -
Lja1g0236 177 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 4 174 - -
Lja1g0236 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 169 IPR000182 GO:0016407
Lja1g0236 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 168 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja1g0236 Acetyltransf_3 5e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0236 - - gmx:100527210 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0236 1 2016395 2018429 Lja1g0236 1 2016395 2018429 ECH