Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0234 ATGGCTTCATATACATCACCTCTCTCATTAATTTTCAATGTGCGAAGGTGCCAACCAGAGCTGGTGCCTCCATGTAAACCCACTCCTCATGAAGTTAAACTGTTATCCGACATAGATGATCAAGATGGCCTTCGTTTCCAAATTCCTCTCATATTTATTTATCGTCATAAGCCATCAATGGCAGAGAAAGACCCTGTTCAAGTCATTAGAGAGGGACTTTCAAAAACACTGGTGTTCTACTACCCCTTTGCAGGTAGGCTTAGAGAGGGACCTGGACGCAAATTGATGGTGGATTGTACAGGGGAGGGTGTATTGTTCATTGAAGCTGATGCGGATGTAACACTTGATCAATTTGGTGACGCTCTTCAACCTCCATTCCCTTGTTTCCAAGAGCTCTTATATGATGTTCCAGGCTCAGAGCAAGTTACTAATTGTCCTCTTCTACTCATACAGGTAACACGCCTTAAGTGCGGTGGTTTCGTTGTGGCCATCCGAATGAACCACACCATGAGTGATGGAGCGGGTTTGAAGCAATTCCTGAATGCCCTGGCAGAATTGTGTCAGGGCGCATCCCAACCATCCGTTCAACCTGTGTGGCAACGAGAGCTCTTAATGGCGAGAGACCCACCACACATCACATTCAACCATCGTGAATACGAGCAAGTACTAGATACCACCAAGGGAATTGGAACACCCATCATCGTTGATCAATCATTCTTTTTCGGACCTGCCGAAATCACCGCTCTTCGCCGCTTGATTCCCTTTCATCTTCGCAAATGCACCACTGTTGATGTTATCGCGGCATGCTTTTGGCATTGTCGCACAAAAGCTTTGCAAATAGACCCAAATGATGACGTTCGCATGATGGTCCTCGTCAATGCACGTGCCAGGTTTAACCCCCCATTACCCGTCGGCTATTATGGTAACGGTTTTTCATACCCAGCGGCGGTCACCACTACAGGGAAGCTTTGCAGGAACTCGATTGGCTATGCAGTTGAGTTAATAAAGAAAGCGAAAGGTGAAGTCACAGAGGAGTACATGCATTTTGTAGCGGATTTTATGGTTGTTAATGGACGGTGTTTATTTACAACTGTAAGAACTTGTATTCTGTCAGATTTGACACGTGCTAGGTTTGAAGAAGTTAATTTTGGGTGGGGCGAAGCGTTGTATGGAGGAGTGGCCAAAGGTGGTGCTGGGGACTTTCCTGGAGCAACCTATATGGTGCCGCACAAGAATGAAAAAGGAGAAGAAGGTATAGTGTTACCGATTCGCTTGCCTCCTGAAGCTATGAAGAGGTTTGCCAAAGAGTTGGATGACATGATTGAGAACCAAAACCAACTTGCAAGGAGTAAGATCGGCCCTAGTTTTACCAATTCTGCCTTATAA 1386 0.4574 MASYTSPLSLIFNVRRCQPELVPPCKPTPHEVKLLSDIDDQDGLRFQIPLIFIYRHKPSMAEKDPVQVIREGLSKTLVFYYPFAGRLREGPGRKLMVDCTGEGVLFIEADADVTLDQFGDALQPPFPCFQELLYDVPGSEQVTNCPLLLIQVTRLKCGGFVVAIRMNHTMSDGAGLKQFLNALAELCQGASQPSVQPVWQRELLMARDPPHITFNHREYEQVLDTTKGIGTPIIVDQSFFFGPAEITALRRLIPFHLRKCTTVDVIAACFWHCRTKALQIDPNDDVRMMVLVNARARFNPPLPVGYYGNGFSYPAAVTTTGKLCRNSIGYAVELIKKAKGEVTEEYMHFVADFMVVNGRCLFTTVRTCILSDLTRARFEEVNFGWGEALYGGVAKGGAGDFPGATYMVPHKNEKGEEGIVLPIRLPPEAMKRFAKELDDMIENQNQLARSKIGPSFTNSAL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0234 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 443 - -
Lja1g0234 461 Gene3D - 220 437 IPR023213 -
Lja1g0234 461 Pfam Transferase family 17 439 - -
Lja1g0234 461 Gene3D - 10 219 IPR023213 -
Lja1g0234 461 PANTHER ALCOHOL ACYLTRANSFERASE 12 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0234 Lja-Chr1 2005109 2007111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0234 45 437 Monolignol Biosynthesis Gene Families AT5G48930 28.606 1.92e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0234 K19861 - gmx:100787907 659.062