Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0232 ATGGCTTCATCTACATCACCTCTCTCATTAATTTTCAATGTGCGAAGGTGCCAACCAGAGCTGGTGCCTCCATGTAAACCCACTCCTCACGAAGTTAAACTGTTATCCGACATAGATGATCAAGATGGCCTTCGTTTCCAAATTCCTCTCATATTTATTTATCGTCATAAGCCATCAATGGCAGAGAAAGACCCTGTTCAAGTCATTAGAGAGGGACTTTCAAAAACACTGGTGTTCTACTACCCCTTTGCAGGTAGGCTTAGAGAGGGACCTGGACGCAAATTGATGGTGGATTGTACAGGGGAGGGTGTATTGTTCATTGAAGCTAATGCGGATGTAACACTTGATCAATTTGGTGATGCTCTTCAACCTCCATTCCCTTGTTTCCAAGAGCTCTTATATGATGTCCCAGGCTCATAG 420 0.4381 MASSTSPLSLIFNVRRCQPELVPPCKPTPHEVKLLSDIDDQDGLRFQIPLIFIYRHKPSMAEKDPVQVIREGLSKTLVFYYPFAGRLREGPGRKLMVDCTGEGVLFIEANADVTLDQFGDALQPPFPCFQELLYDVPGS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0232 139 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 136 - -
Lja1g0232 139 Pfam Transferase family 16 135 - -
Lja1g0232 139 Gene3D - 13 139 IPR023213 -
Lja1g0232 139 PANTHER ALCOHOL ACYLTRANSFERASE 12 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0232 Lja-Chr1 1973511 1973930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0232 45 120 Monolignol Biosynthesis Gene Families AT5G48930 43.421 2.43e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0232 K19861 - tcc:18599665 223.787