Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0220 ATGAGACTCGGTGAGGTTAACCGTGCTGTCAGTTCTACTGCCCTCAACAACCGTAGTCGTTCGCACAGTGTGCTTACTGTGCATGTTCATGGTAAAGACACATCCGGGAGCTCCATTCGTAGCTGGCTGCACTTGGTAGGCCTTGCTGGAAGTGAAAGAGTAGACAAGTCTGAAGTTACAGGAGAAAGACTAAAGGAAGGACAATTCATTAACGAGTCTCTCTCTTGTTTAGGAGATGTGATCACAGCCCTGTCTCAGAAGAATTCTCACATTCCTTACTGGAACAGCAAACTCACCCTTCTTTTGCAGGACTCCTTAGGTGGACATGCTAAGATGTTGATGTTTGCTCACATGAGTCCAGAAGCGGATTCTTTTGGTGAAACAGTGGGTACTCTAAAGTTTGCTCAGCTTGTTTCCACTGTGGAACTTTGGGGCTGCACGTTCGATCAAAGAAACCAGTGA 462 0.4654 MRLGEVNRAVSSTALNNRSRSHSVLTVHVHGKDTSGSSIRSWLHLVGLAGSERVDKSEVTGERLKEGQFINESLSCLGDVITALSQKNSHIPYWNSKLTLLLQDSLGGHAKMLMFAHMSPEADSFGETVGTLKFAQLVSTVELWGCTFDQRNQ* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0220 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 142 IPR027417 -
Lja1g0220 153 Pfam Kinesin motor domain 1 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0220 153 Gene3D Kinesin motor domain 1 144 IPR036961 -
Lja1g0220 153 PANTHER KINESIN-LIKE PROTEIN KIN-14L 1 143 - -
Lja1g0220 153 ProSiteProfiles Kinesin motor domain profile. 1 141 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0220 153 PRINTS Kinesin heavy chain signature 12 29 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0220 153 PRINTS Kinesin heavy chain signature 42 60 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0220 153 PRINTS Kinesin heavy chain signature 91 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g0220 153 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 143 - -
Lja1g0220 153 SMART kinesin_4 1 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0220 Lja-Chr1 1877747 1878431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0220 4 141 Calmodulin-binding Proteins AT5G65930 51.429 1.21e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0220 K10406 - lja:Lj1g3v4957810.1 307.375