Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0195 ATGGAGAGGGTGTTTTCAGTGGAGGAGATAACGGAGGAGTATTGGTCGTCGGTGGGGAAGGATGAACCGGGGAAGATGAACCGGAGTACTTCAGAGTGGGCTTTTCAGCAGTTTCTGAAGGAGGCTTCTTCTTCTGTGGCGGCTGAACAACCTTGTTCTTCTACTTCTCCTTCTTCCTCTTCCTCTTCTTCTATGGTTGACGTCAAACTCAAAAATGATCCTAGTGTTGTTGTTCCTGTTCCTATTGATTCTGAGGATTATCATGCTATTCTCAAGACCAAGCTCAATCTTGCTTGCGCCGCCGTTGCTATGACTCGGGGATCTTTGGTCAAATCTCAGGATCTTGCCACTCTTCCTGAAAATGGATCACGGGCATCTAATCCTTCTGAAATTGTTGCTGGGGCTACTCTAAAAGAATCTGGCCCTTCTGGAAATGATGCATCTAAATTACAAAATAAAGATGTGAATGTACCAATTGGGGTTCCTACCATGCAAATCAAACCTGCTGTTGCAATCAGGTCAACAACAAGTGGATCATCAAAAGAACTGTCAGATGATGATGATGCTGAGGGAGAGATTAACATGACCGGAAACATGAACCCTGCTGATGCAAAAAGAGTAAGGAGGATGCTTTCTAATAGAGAGTCTGCCAGACGCTCAAGAAGAAGAAAACAGGCTCATTTAACTGAGCTTGAGACACAGGTCTCTGAGTTAAGAGGTGAGAATTCTTCATTGTTGAAGCGCTTAACTGATGTAAGTCAGAAATTCAGTAATGCTGCTGTTGACAACAGAGTACTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAGTTACAGGCTTGAATCCAATATTCAATGGCATGGCTGAGATATCATCAATGGGAATGTCATTGTTTGATGAAAACCCTTCTAGTCATATTGCATCCAGTCATCTGAGAGTCAACAATAATGGATTAGGAGGCATTTCTTCTGTTGAAAGTGTGCAACAGAACAGTGCAGCAACAGTGGTAAGTGGGAACAAAATGGGGAGAACAAGTTCCCTACCAAGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGCAGTGGTACGGATTCACGTGGACCTCTAAATAATGGAGAACAGTAA 1158 0.4335 MERVFSVEEITEEYWSSVGKDEPGKMNRSTSEWAFQQFLKEASSSVAAEQPCSSTSPSSSSSSSMVDVKLKNDPSVVVPVPIDSEDYHAILKTKLNLACAAVAMTRGSLVKSQDLATLPENGSRASNPSEIVAGATLKESGPSGNDASKLQNKDVNVPIGVPTMQIKPAVAIRSTTSGSSKELSDDDDAEGEINMTGNMNPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRGENSSLLKRLTDVSQKFSNAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPIFNGMAEISSMGMSLFDENPSSHIASSHLRVNNNGLGGISSVESVQQNSAATVVSGNKMGRTSSLPRVASLEHLQKRIRSGTDSRGPLNNGEQ* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0195 385 SUPERFAMILY Leucine zipper domain 205 255 IPR046347 GO:0003700|GO:0006355
Lja1g0195 385 MobiDBLite consensus disorder prediction 173 202 - -
Lja1g0195 385 Pfam Basic leucine-zipper C terminal 272 373 IPR020983 -
Lja1g0195 385 Coils Coil 263 283 - -
Lja1g0195 385 PANTHER BASIC LEUCINE ZIPPER 63 319 366 - -
Lja1g0195 385 MobiDBLite consensus disorder prediction 45 67 - -
Lja1g0195 385 Pfam bZIP transcription factor 204 255 IPR004827 GO:0003700|GO:0006355
Lja1g0195 385 Coils Coil 214 248 - -
Lja1g0195 385 Gene3D - 204 259 - -
Lja1g0195 385 PANTHER BZIP TRANSCRIPTION FACTOR 319 366 - -
Lja1g0195 385 PANTHER BASIC LEUCINE ZIPPER 63 1 320 - -
Lja1g0195 385 SMART brlzneu 201 265 IPR004827 GO:0003700|GO:0006355
Lja1g0195 385 PANTHER BZIP TRANSCRIPTION FACTOR 1 320 - -
Lja1g0195 385 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 208 223 IPR004827 GO:0003700|GO:0006355
Lja1g0195 385 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 203 255 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0195 Lja-Chr1 1700667 1704636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0195 1 296 bZIP Transcription Factor Family AT4G02640 39.091 1.40e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g0195 bZIP_C 7.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0195 K25784 - lja:Lj1g3v4979980.1 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0195 1 1700667 1704636 Lja1g0195 1 1700667 1704636 ECH
Lja1g0195 1 1700667 1704636 Lja5g1556 5 16452485 16457548 PCT