Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0184 ATGCATACTCGTGCAAGCCTCTGGCTTTCTCTTGTGTGCATCTGTGTTTTGTTGAATCACATTCATGGTGCATTCAAAGAGGAAGCAGGGTCATTGATCTTGGGTTGTGGATTGGGTGAAGGAGGAGCAAAAGATCCTGATGGAAGACAATGGGGTCCTGATAACAAGTACCTAGCACAAGGTGGTGATCATTCCATCGCATCTAAAGCCTCTTACCAAGACCCTTCTGTTTTATCTGATGTGCCATACATGTCAGCAAGAGTTTTCACATCAGAGACAACATACAATTTCCCTGTTCAACCTGATAAACGTTACTGGCTCAGGCTCCATTTCTATCCCTCTATCTATGGCAATTTCGTCGCCTCCGATTCATTTTTTTCTGTGACTGCAAATGGTGTCACGCTTCTTAGCAATTTCAGCGCCTCAATCACTTGTGAGGCCCTCTCACAAGCTTACATTGATAGAGAGTATTCCCTTGCACCTTTGAATTCAGAAACCTTAACCCTCACTTTCAAGCCTTCTTCTGACAAGGCTTTTGCTTTTGTCAATGGCATTCAACTCATCCCAATACCTGAAATCTTTGATGCTGCTATATTGGTTGGGTATTCTGATCAAACCATGGATGTCAAGACCTTGAATTTGCAAACCATGTTCAGATTAAACGTTGGTGGACAATACATATCTCCAACACAAGATTCTGGCCTTACAAGGATGTGGTATGATGACACACCTTACCTGTATGGTTCAGCTAGTGGTGTTACCAATCAAGCTACGGACGATGTTGCCATCAATTACCAAACAATGCCAAACTACACTGCTCCTCCTGCTGTCTACTCCACATCAAGATCAATGGGGGCTGATAAGGCTGTCAACATGGGCTACAATCTCACATGGATTTTCCAAGTTGACCCAAATTCCATGTACCTTGCAAGGTTGCATTTCTGTGATTACTACTATTCCAAGTCCAATGAGATTGTTTTCGACATCTTTATCAACAACCAAACAGCACAGACTCAAGCTGATGTGGTAGGGTGGTCAGGAGGTAAAGGGGTACCAGTATACAAGGACTATGTGGTGTATGTTCAAGATAGGGTGGAGGATCAGATGCTCTGGCTTGCTCTACATCCAGATCCTGATAGTAAGCCAGAGTTCTATGATTCTCTACTCAATGGGGTGGAGATTTTCAAGCTCAATGACACAAACTTGTCTGGCCCTAATCCTCAGCCTTCAGATATGCTTCTCAAGGATCAAGAGGAGCAAAATGCAGGTTTCCACAACCACAAAGCATATAATAGGAGTGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTCTTGCAATAATGGCTGTAATATTTGTTGCTGTCTACCAGAAGAGGAGAGCTCCGGGATCCGATGGAACGCACACGAGCTGGCTGCCTATCTATTTGAACTCAAACGCAAATGGCAGCAAGTCCAGCACATCCGGGAAGAGCATTGCAAGTGCCAACCTCGCCGCGGCAGCGCAAGGTCTTTGCCGGTTCTTCTCCTTGCAAGAGATAAAGCATGCAACCAAGAACTTTGAAGAGTCCAATGTGATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGCGTCATTGACAATGGAATGAAAGTGGCAATTAAAAGGTCCAACCCGCAGTCAGAGCAAGGAGTCAATGAATTCCAGACTGAAATTGAGATGCTTTCCAAGCTGAGGCACAAGCATTTGGTGTCCTTGATTGGATTTTGCGAGGAGGACAATGAGATGTGCCTGGTTTATGATTACATGGCTCTTGGAACCTTCAGGGAACATTTGTATAAGGGCAACAAGCCTGTGGCTACCCTATCATGGAAGCAAAGGTTGGAGATCTGCATTGGATCTGCAAGAGGCCTTCACTACCTTCACACAGGAGCTAAGTACACGATCATTCATAGAGATGTCAAAACAACTAACATTCTCTTGGATGAGAACTGGGTTGCCAAGGTTTCAGATTTTGGCTTGTCGAAAACAGGTCCTGATATGAATCAAGGCCATGTTAGCACTGTGGTGAAGGGAAGTTTTGGCTACTTGGATCCTGAGTACTTCAGAAGGCAACAACTGACCGAAAAATCTGATATTTATTCATTTGGGGTTGTCCTGTTTGAAGCCCTCTGTGCAAGGCCTGCTCTGAATCCTAGTCTTCCAAAAGAACAAGTTAGTCTTGCAGAATGGGCACTGCTCAATATAAAAAAAGGAACCATAGAGGATCTCATTGACCCTCATATCAAGGGAAAGATTAATCCAGAAAGCTTGAAAAAATTTGTAGTCACTGCTGAAAAGTGCTTGTCTGATTGTGGAGCTGATCGTCCCTCCATGAATGATCTGCTGTGGAATCTAGAATTTGCTCTGAACCTGCAAGAAAACGTTGACGGCTCAACTCACTCGGCACCCGTTGATCAAAGCGAGTTTGAAGAGATAAGCTTGGGAAACAACGACATAGCAAACCATTACAAAAACCTGAGCCTTGGAAGTGAGTATGAGCTTAGCCAGGATTCCAATGAGAGTCCCACTGCCATCTTTGCAGAACTGATCAACCCAAAAGGGCGATGA 2592 0.4456 MHTRASLWLSLVCICVLLNHIHGAFKEEAGSLILGCGLGEGGAKDPDGRQWGPDNKYLAQGGDHSIASKASYQDPSVLSDVPYMSARVFTSETTYNFPVQPDKRYWLRLHFYPSIYGNFVASDSFFSVTANGVTLLSNFSASITCEALSQAYIDREYSLAPLNSETLTLTFKPSSDKAFAFVNGIQLIPIPEIFDAAILVGYSDQTMDVKTLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGSASGVTNQATDDVAINYQTMPNYTAPPAVYSTSRSMGADKAVNMGYNLTWIFQVDPNSMYLARLHFCDYYYSKSNEIVFDIFINNQTAQTQADVVGWSGGKGVPVYKDYVVYVQDRVEDQMLWLALHPDPDSKPEFYDSLLNGVEIFKLNDTNLSGPNPQPSDMLLKDQEEQNAGFHNHKAYNRSAVIGGAAGGAAGLAIMAVIFVAVYQKRRAPGSDGTHTSWLPIYLNSNANGSKSSTSGKSIASANLAAAAQGLCRFFSLQEIKHATKNFEESNVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDNEMCLVYDYMALGTFREHLYKGNKPVATLSWKQRLEICIGSARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPDMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDIYSFGVVLFEALCARPALNPSLPKEQVSLAEWALLNIKKGTIEDLIDPHIKGKINPESLKKFVVTAEKCLSDCGADRPSMNDLLWNLEFALNLQENVDGSTHSAPVDQSEFEEISLGNNDIANHYKNLSLGSEYELSQDSNESPTAIFAELINPKGR* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0184 863 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0184 863 SUPERFAMILY Protein kinase-like (PK-like) 503 796 IPR011009 -
Lja1g0184 863 CDD STKc_IRAK 527 794 - -
Lja1g0184 863 Gene3D - 34 189 - -
Lja1g0184 863 Gene3D - 212 397 - -
Lja1g0184 863 Pfam Malectin-like domain 35 396 IPR024788 -
Lja1g0184 863 Gene3D Phosphorylase Kinase; domain 1 481 596 - -
Lja1g0184 863 ProSiteProfiles Protein kinase domain profile. 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0184 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lja1g0184 863 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Lja1g0184 863 Pfam Protein tyrosine and serine/threonine kinase 524 788 IPR001245 GO:0004672|GO:0006468
Lja1g0184 863 PANTHER OS07G0166700 PROTEIN 20 850 IPR045272 GO:0004714|GO:0006468
Lja1g0184 863 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 850 - -
Lja1g0184 863 Gene3D Transferase(Phosphotransferase) domain 1 600 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0184 Lja-Chr1 1586728 1589319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0184 32 863 Receptor kinase-like Gene Family AT3G51550 52.644 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g0184 Malectin_like 8.4e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0184 - - gmx:102659961 1366.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0184 1 1586728 1589319 Lja5g1569 5 16629812 16632400 PCT