Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0172 ATGGATTGGGGTTTTGTGCATAAGACATGGGATAAATGGGCTTCTACAAACATTGGTTATTCTGGTTATCCTTTGAAAGCTGCATTGCTAATCAATTATGACCCAACTGGACCGTCTCGCTTGTTATCTACAGTTGCTGAACAAGAAGGAATGAAAGCCAATCCCATTGAATTGAGCCACTTTGTGAACTTCATCAAACACAATAAACTCCAGACAGAGAACTTCATTATTGGGTCCAATCAGTACTTGGTCACGTCGATTCACGAGAATTGGTTTAGTGCAAGGTGCATAAACACATTAAAGGCTGCTGGGGAAGGTGCAATTGTTATGCAAACAGCAGCATATATCTTGGTTGCTCTGTATGAAGGTTCGATCGGTCCAGCATCTCGTGCAATGGCAGCTGCTGATCAGTTAACTTGGCAATTAGGGCGAAAAAATCTGTAG 444 0.4212 MDWGFVHKTWDKWASTNIGYSGYPLKAALLINYDPTGPSRLLSTVAEQEGMKANPIELSHFVNFIKHNKLQTENFIIGSNQYLVTSIHENWFSARCINTLKAAGEGAIVMQTAAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0172 147 Gene3D Dynein light chain 2a, cytoplasmic 9 146 - -
Lja1g0172 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Lja1g0172 147 SUPERFAMILY Profilin (actin-binding protein) 10 142 IPR036140 -
Lja1g0172 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Lja1g0172 147 Pfam Profilin 9 142 IPR005455 GO:0003779
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0172 1 147 Carbohydrate Esterase AT4G19410 66.216 9.43e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0172 - - gmx:100802211 281.952